Gene SO_0622 details

Gene Information

• Locus tag: SO_0622
• ID: 1168488
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 649660
• End bp: 650334
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637342613
• Product: DNA-binding response regulator
• Protein accession: NP_716255
• Protein GI: 24372213
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGC TACTCGTTGA AGATAACCCC ATGCTGGTCT CCGAATTGGA GAAGCAACTC 
AAACAGGCTG GCTATGTTAC TGATATTACA GACAAAGCGC TTGAAGCCGA TTACCTAGTA 
AAAGAAACCC AATACGACTG TGTGATTTTA GATATTGGGC TTCCCGACGG TAATGGATTG 
GAATTACTCG AAGGCTGGCG AAATCAAGGG ATTAGCACCC CAGTGATCAT GCTAACCGCT 
CGCAGCCAAT GGCATGAAAA GGTCGAAGGC TTTAATGCTG GCGCCGATGA TTATTTAGGT 
AAACCCTTCC ACGCGCAGGA ATTGCTAGCG CGAATTCAGG CACTTATTCA TCGTGCCCAT 
GGCCGTTTAA ATAATCCCAA CAAGCAACTT AGCTATGGCG GCGTCACCTT AGATGAAGCC 
GAGCAAACCG TCAGCGTTGG CGAGCAGCTA TATGAATTGA CTGCGATGGA GTTTAGACTG 
TTAAAAATCT TCCTCATGTC GCCTAAGAAG CTGTTATCTA AGGCACAATT AACCGATAAG 
CTCTATCAGT TTGACGACGA GAAAGAGAGT AATGTGGTTG AGGTTTACGT GACTCATCTG 
CGTAAAAAAC TTGGCAAAAC CGCAATAGAA ACCCGCCGCG GTCAAGGTTA TATCTTCCAC 
GGCGTGGCTG CATGA 

 

Protein sequence

MKLLLVEDNP MLVSELEKQL KQAGYVTDIT DKALEADYLV KETQYDCVIL DIGLPDGNGL 
ELLEGWRNQG ISTPVIMLTA RSQWHEKVEG FNAGADDYLG KPFHAQELLA RIQALIHRAH 
GRLNNPNKQL SYGGVTLDEA EQTVSVGEQL YELTAMEFRL LKIFLMSPKK LLSKAQLTDK 
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GVAA