Gene SO_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0566 
Symbol 
ID1168436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp587408 
End bp588187 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID637342559 
ProductABC 3 transport family protein 
Protein accessionNP_716201 
Protein GI24372159 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATC TGGAACTGAT GTCGATCCTG CTGCCTGCGC TGGCAGCGGG GATTTTGGTG 
TTATCTACGC ATATTGTACT AGGTAAACAA GTGCTTAAGC GTGGGATCAT CTTTATCGAC
TTAGCGATTG CTCAGGTGGC GGCATTGGGA GCCATTGTGG CGCATATGGA TCACAGATTA
GAAGAGATGC CATTTTCTCA TGTGTTGATG CCTGCCTTAT TTGCCCTTGC AGGAGCCGGA
TTTATCGCTT GGTTATCTAA GCGAATGGCG GGTGAGTTAG AAGCCATGAT AGGCTGCTTT
TACGTGCTAT CGGCCGTGGC TGCCATGTTA TTGTTGGCAA ACGATCCCCA TGGTGCCGAG
TTGCTAAAGC AATTGATGTC AGGTCAGATC CTTTGGGTTA GCTGGTCACA ATTAGTGTTA
CCCACAGTGG TGTATGTTCT GGTGCTAGCG GTGATTTTTG TGCGACCACA GATATTAAAT
GGTGCGGGAT TCTATCTCCT GTTTGCCCTC GTTATCACCT TGTCAGTTGA GTTGGTGGGC
GTCTATTTAG TGTTTAGTAC ATTGATTCTG CCGGCACTTG CCCTGAACAA GTACCAAGGT
AAAAACGGCT TGTTTTACGC TTATCTTGTA GGCTTGATGG GTTACTTGCT TGGACTGGTA
TTATCGGCAA CCATGGATTT GCCTAGTGGA GCGGCGATTG TCGCGACATT AGCCATCAGT
GCGCTGGTAT TCCGTTTAGG CTTAAGTAAA GCGGCAAGGG TAAGCCATAC CCAAAGCTAA
 
Protein sequence
MFDLELMSIL LPALAAGILV LSTHIVLGKQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL 
EEMPFSHVLM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE
LLKQLMSGQI LWVSWSQLVL PTVVYVLVLA VIFVRPQILN GAGFYLLFAL VITLSVELVG
VYLVFSTLIL PALALNKYQG KNGLFYAYLV GLMGYLLGLV LSATMDLPSG AAIVATLAIS
ALVFRLGLSK AARVSHTQS