Gene SO_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0547 
Symbol 
ID1168416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp569883 
End bp570575 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID637342540 
Producthypothetical protein 
Protein accessionNP_716183 
Protein GI24372141 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT CACTGTACAG TGTTTTGGCA TTATCAACGG GATTATTACT AACCAATAAC 
GCCTTTGCGG CGGTGTCTGG CAATATTGGC GGCACCTCAA ACTATCTATG GCGCGGGGTA 
ACTCAAACCA ATGATGCGGT CGCTATCCAA GGCGGTATTG ACTACAGTCA TGACTCAGGA 
TTCTATGCGG GCACATGGGC ATCAAATGTC GATTTTGGCA ATGACACAAG CTACGAGTTA 
GACCTCTATG CAGGTTACGG TGGCAGTATC ACCGACGATC TCAGCTATGA TTTTGGCTAC 
CTCTATTATG CTTATCCCGA TGCTGAAGGC AGTATCGATT TTGGTGAACT CCACGGTACC 
ATCACTTGGA AGTGGGTCGA ACTCAGTTAT TCCCACGTGA TCAATGCGGG TGAAGACGTC 
GCGGCAGAAC CATTCGATAA CAAAGATATG AGTTACCTTG CAGCCACAGC TTCTTTCCCT 
TTAACCGAAA AACTTAGCCT GTCATTCCAC TATGGCTACT CCACGGGCGA TGTGGTTGAA 
GCTTGGTTTG CGGAAGATAA CTACGCCGAT TACAACGTGA CACTCAGTGC CGATACCAGC 
ATGGGAACCA TCTCTTTTAT GGTGTCTGAT ACCGATCTGA GCGATGACGA TGCAAAAATC 
GCTTTAGGCT ATTCCTATAG TTTTGATTTA TAA
 
Protein sequence
MRKSLYSVLA LSTGLLLTNN AFAAVSGNIG GTSNYLWRGV TQTNDAVAIQ GGIDYSHDSG 
FYAGTWASNV DFGNDTSYEL DLYAGYGGSI TDDLSYDFGY LYYAYPDAEG SIDFGELHGT 
ITWKWVELSY SHVINAGEDV AAEPFDNKDM SYLAATASFP LTEKLSLSFH YGYSTGDVVE 
AWFAEDNYAD YNVTLSADTS MGTISFMVSD TDLSDDDAKI ALGYSYSFDL