| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0546 |
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| Symbol | rimK-1 |
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| ID | 1168415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 568931 |
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| End bp | 569836 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342539 |
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| Product | ribosomal protein S6 modification protein |
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| Protein accession | NP_716182 |
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| Protein GI | 24372140 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCG GTATTTTATC TCAGTTTCCT GAATTGTATT CCACCCGCCG TTTAGTGGCC
GCCTGCGAGA GTCGTGGTCA TGAGGCCGTG GTGATTAATA CCTTGAATTG CTACATGAAT
ATTAACTCCA TCAAACCTAG CATCCACTAT CAAGGGCAAG AATTAACGGG ATTTGATGCG
ATTATTCCAC GCATTCACGC CAGTGTGACT TTTTATGGCT GCGCAGTGGT GCGTCAGTTT
GAAATGATGG GCGTATTTGC AGCCAATGAC TCTATCTCGA TTGCGCGCTC ACGGGATAAG
TTACGGGCGC TGCAATTACT TTCGCGCAAA GGCATTGGTA TGCCTATCAC TGGATTTGCC
AATAAACCTA ATGATATTCC CGATCTGATT AATATGGTGG GTGGGGCCCC TTTAGTGATC
AAGTTGCTCG AAGGCACACA GGGGATTGGT GTGGTGTTAG CCGAAACTAA AACCGCTGCA
GAGAGCGTTA TTGAAGCCTT TTTAGGACTC AAAGCCAATA TTATGCTGCA GGAGTATATT
AAGGAATCTA ACGGCAGTGA TATTCGCTGT TTTGTGGTGG GCGATAAAGT GGTCGCCTCG
ATGAAGCGAC AAGGTCCTGA GGGCGATTTT CGGTCTAATC TGCACTTAGG TGGCTGCGGT
GAAAAAGTGA AAATCACTCC TAAAGAGCGC AAGATGGCCG TCGCCGCAGT AAAAGCAATG
GGATTAGTGG TCGCTGGGGT CGACATTTTA CGTTCGAATC GTGGTCCGCT GATCCTTGAA
GTGAACTCGG CCCCCGGAAT TGAAGGTATT GAGCAAACTA CGGGTATTTC GGTGACTGAA
CCTATCGTGG AATATATTGA GAAAATGGTA TTAGCCCAAA AATCGAATCG TCCTGTGATT
GCTTAA
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| Protein sequence | MKIGILSQFP ELYSTRRLVA ACESRGHEAV VINTLNCYMN INSIKPSIHY QGQELTGFDA
IIPRIHASVT FYGCAVVRQF EMMGVFAAND SISIARSRDK LRALQLLSRK GIGMPITGFA
NKPNDIPDLI NMVGGAPLVI KLLEGTQGIG VVLAETKTAA ESVIEAFLGL KANIMLQEYI
KESNGSDIRC FVVGDKVVAS MKRQGPEGDF RSNLHLGGCG EKVKITPKER KMAVAAVKAM
GLVVAGVDIL RSNRGPLILE VNSAPGIEGI EQTTGISVTE PIVEYIEKMV LAQKSNRPVI
A
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