| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0523 |
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| Symbol | |
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| ID | 1168393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 546161 |
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| End bp | 547093 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342517 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_716159 |
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| Protein GI | 24372117 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA ATCGCGTGCA GATATTTGCT CAGGTCGTCG AGCAAGGTAG CTTTACGGGC
GCCGCCAAAG CCCTCGGACT GACTAAGGCG ACGGTCAGTC GCAAAATTGC CGAACTTGAG
GCCGATACGG GTACTCAGTT GTTATTCCGC ACCACTCGTG CCCTTAAACT CACCGAGGCT
GGCTCAAGTT ATTACAATCG AATCAACAAG ATCTTAAGTG ATCTTCAAAG CGCCGAAAAT
CAGCTCAGTG CCCACCAGCA ATTAATCAAA GGCAACCTAA AAATTGTCTG TCCTATCGAA
TTAGGGCAAT TGTTTCTCGG TCCGATTTTT GCCAAGTTTT TAACGCTTTA CCCTGATATC
ACCATTGATG CAGAACTCAC TAATCGCAAA GTCGATGTGA TAGAAGAAGG TATCGATCTA
CTGTTCCAAA TTGCCGATTC CCACGATAGC CGTCTTCAGA GCTATTCCTT GGTTAATGCC
TATAAATCCT TAATGGCCAG TCCCAAATAT TTAGCCGAAC ATGGCACGCC AAAAGTGCCT
CAGGATTTAG CAAAACATAA AGCGATTCGC TTACAGTCAG CCCACATTGA GGGAGCCTGG
AAGTTATTTG ATGGCAAATC TTGGGTGGTG ATTGAACCTG TGACGCAATT AACCGTGAAT
AATGTCACCA TCGCCCGCGA AGCGGCCATT GCGGGGCTGG GTATTACGGC GGTGCCATCG
ATTATTGCAC AAGAAGCTGT AGAGAAAGGT TATTTGGTAC CTCTCCTTGA CGATTATCCA
ATGGTGCAAA CCAAAGTGGT ACTCAGCTAT CCCAAGCGTG CCTATTTACC ACGCAAGTAT
CGTGTCTTTA TCGAGTTTAT CTATGCAGCC TTGTTTAAAC GTTGGGGATC ACAGGTATTG
GAAGTGCCAG AATTTATTGA CCAGCAAAGA TAA
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| Protein sequence | MDLNRVQIFA QVVEQGSFTG AAKALGLTKA TVSRKIAELE ADTGTQLLFR TTRALKLTEA
GSSYYNRINK ILSDLQSAEN QLSAHQQLIK GNLKIVCPIE LGQLFLGPIF AKFLTLYPDI
TIDAELTNRK VDVIEEGIDL LFQIADSHDS RLQSYSLVNA YKSLMASPKY LAEHGTPKVP
QDLAKHKAIR LQSAHIEGAW KLFDGKSWVV IEPVTQLTVN NVTIAREAAI AGLGITAVPS
IIAQEAVEKG YLVPLLDDYP MVQTKVVLSY PKRAYLPRKY RVFIEFIYAA LFKRWGSQVL
EVPEFIDQQR
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