| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0520 |
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| Symbol | |
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| ID | 1168390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 541742 |
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| End bp | 544969 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637342514 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | NP_716156 |
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| Protein GI | 24372114 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAAA AAGCAATCGA AGCCGCGATT AAAAATCGGC TATTAGTGGT GTTGGCGCTG
CTGGCGGCGG TCGCTGCCAG TGTGGCCATG TTGCCCAAAT TGAATCTCGA TGCCTTTCCC
GATGTCACCA ACGTGCAAGT GACCATCAAT ACCGAGGCCG AAGGTTTGGC TGCTGAAGAG
GTGGAGAAAC TCATCAGTTA TCCGGTCGAA TCGGCCATGT ATGCTTTGCC AGCGGTGACT
GAAGTACGTT CGTTATCGCG CACAGGCTTG TCCATTGTGA CGGTCGTCTT TGCCGAGGGC
ACGGATATTT ACTTTGCCCG TCAGCAAGTG TTTGAGCAGT TACAGGCGGC GCGGGAGATG
ATCCCAAGCG GGGTGGGTGT GCCAGAAATT GGCCCTAACA CCTCAGGATT GGGGCAGATT
TATCAGTATA TTTTGCGGGC AGATCCAAGT GCAGGCATCA ATGCCGCCGA GCTGCGAAGT
CTTAACGACT ACCTCGTCAA ACTTATCTTG ATGCCCGTTG GTGGGGTGAC CGATGTGTTA
TCTTTTGGCG GCGAAGTTCG CCAATATCAG GTGCAGGTCG ACCCTAATAA GTTGCGTGCC
TATGGCTTGT CGATGGCGCA GGTGAGTGAG GCGCTCGAGA GCAATAATCG TAACGCTGGT
GGCTGGTTTA TGGACCAAGG CCAAGAGCAA TTAGTGGTGC GGGGTTATGG CATGTTGCCC
GCCGGAGAGG CAGGACTTGC CTCGATTGCC CAAATTCCAC TAACGGAAGT GCGTGGCACA
CCCGTGCGAG TGGGGGATAT CGCTAAGGTC GATTTTGGTA GTGAAATCCG CGTGGGCGCT
GTGACGATGA CGCGCCGCGA TGAGGCGGGT CAGGCGCAAG CGCTAGGTGA AGTGGTTGCG
GGTGTGGTGC TTAAACGCAT GGGCGCCAAC ACGAAAGCGA CCATCGATGA TATTGATGCG
CGGATTAATC TGATTGAACA GGCGCTGCCC AAGGGCGTGT CCTTTGAGGT GTTTTACGAC
CAAGCAGATT TGGTGGATAA AGCCGTAGCC ACGGTGCGCG ATGCGCTGTT AATGGCCTTT
GTGTTTATTG TGGTTATCTT GGCGCTGTTC CTTGTGAATA TTCGCGCCAC CTTGCTGGTG
CTACTGTCGA TTCCCGTTTC TATTGGTTTG GCGCTGATGG TGATGTCCTA CTATGGCCTT
TCTGCCAACC TGATGTCCCT TGGCGGTTTG GCGGTGGCCA TTGGTATGTT GGTCGATGGC
TCTGTGGTGA TGGTTGAGAA TATTTTCAAG CATTTAACTC AGCCGGATCG CCGCCATTTA
ACACAGGCCA GAGCGCGTGC CGATGGTGAA GCCGACCCGT ACCATGGTGA TGAGGATGGT
GGTGTTAACG CTGATGATGA CGATCATCAG GGGAATATGG CTGTGCGGAT TATGTTGGCA
GCTAAAGAAG TGTGTAGTCC TATCTTCTTC GCAACGGCGA TTATTATTGT GGTGTTTGCA
CCACTATTTG CCCTGGAAGG CGTAGAAGGT AAGCTGTTTC AGCCGATGGC CGTCAGCATT
ATTTTGGCGA TGATTTCAGC TTTGCTAGTG GCGTTAATTG CGGTGCCAGC CTTGGCGGTA
TATCTGTTTA AACGTGGGGT TGTGCTCAAA GAAAGTGTGA TCTTAAGGCC GCTGGATAAC
GCATATCGCA AACTGCTCAG TGCAACGCTA GCGCGCCCTA AAATGGTGGT ACTCAGTGCG
GTTATTATGT TTGTCATGAG TATGGCATTA CTGCCTAGAC TCGGCACCGA GTTTGTGCCC
GAGTTAGAGG AAGGCACGAT TAACCTGAGG GTCACGTTAG CACCAACCGC CAGCCTTGGC
ACCTCTTTGG ATGTCGCGCC CAAACTTGAG GCTTTGCTGC TGCAATTCCC CGAGGTGGAA
TATGCCTTAA GCCGCATCGG TGCGCCTGAA TTAGGTGGCG ATCCTGAGCC TGTGAGCAAT
ATCGAAATTT ATATTGGTCT TAAACCTATC GAAGAGTGGC AATCGGCTAG CTCGCGTTTA
GCGCTGCAAC GGCTGATGGA AGAAAAACTC AGTGTCTTTC CTGGTCTATT GCTGACCTTC
TCACAACCGA TTGCGACTCG AGTTGATGAG TTACTCTCTG GGGTGAAGGC GCAGTTAGCG
ATTAAACTCT TTGGTCCCGA TCTCGCTGTG TTGTCGGACA AGGGCCAAGT GCTCACCGAT
CTGGTGGCGA AAATCCCCGG TGCAGTAGAT GTGTCTCTCG AGCAGGTGAG TGGTGAAGCG
CAGTTGGTGG TGCGCCCCGA TCGCTCGCAA CTCGCCCGTT ATGGCATCAG TGTCGATCAG
GTGATGACAC TCGTGAGCCA AGGTATTGGT GGCGCCAGTG CCGGACAAGT GATCGATGGT
AACGCCAGAT ACGACATTAA TTTACGCCTT GCCGCCGAGT TTCGCAGCAG TCCGGATGTG
ATTAAGGATT TGCTGTTGAG TGGCACTAAT GGCGCAATTG TGCGCTTAGG TGAGGTGGCC
AGCGTTGAAG TGGAAATGGC GCCGCCGAAT ATTCGCCGTG ACGATGTGCA GCGCCGAGTG
GTGGTGCAAG CGAACGTGGC AGGGCGTGAT ATGGGTTCAA TAGTGAATGA TATCTACGCG
CTAGTGCCAA AGGCCGATTT GCCTGCTGGA TATACCGTGA TTGTGGGTGG GCAGTATGAG
AACCAACAGC GGGCACAGCA AAAGCTGATG TTGGTGGTGC CAGTCTCTAT CGCTTTGATC
GCACTGTTGT TGTACTTCTC CTTTGGGGCG GTTAAGCAGG TACTGCTAAT TATGGCGAAC
GTGCCGCTTG CGCTCATCGG TGGCATTGTG GCGCTGTTTG TCAGCGGCAC TTATCTGTCG
GTGCCAAGCT CCATTGGTTT TATTACTCTG TTTGGGGTGG CAGTTCTCAA CGGTGTGGTA
TTAGTGGATT CGATTAACCA ACGCAGGCAA AGCGGTGAGT CGCTCTATGA TTCTGTATAT
GAAGGAACCG TTGGTCGTTT GCGCCCGGTG TTGATGACGG CATTGACCTC CGCCTTAGGG
TTAATTCCGA TCTTAGTATC ATCGGGCGTG GGTAGTGAAA TCCAAAAACC GCTGGCGGTG
GTGATCATTG GCGGTTTGTT TAGCTCAACG GCGTTGACGT TATTGGTATT GCCGACGTTA
TACCGCTGGT TATACCGACG CGATAAACGT ATCGATGAGC TAGGTTAG
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| Protein sequence | MLQKAIEAAI KNRLLVVLAL LAAVAASVAM LPKLNLDAFP DVTNVQVTIN TEAEGLAAEE
VEKLISYPVE SAMYALPAVT EVRSLSRTGL SIVTVVFAEG TDIYFARQQV FEQLQAAREM
IPSGVGVPEI GPNTSGLGQI YQYILRADPS AGINAAELRS LNDYLVKLIL MPVGGVTDVL
SFGGEVRQYQ VQVDPNKLRA YGLSMAQVSE ALESNNRNAG GWFMDQGQEQ LVVRGYGMLP
AGEAGLASIA QIPLTEVRGT PVRVGDIAKV DFGSEIRVGA VTMTRRDEAG QAQALGEVVA
GVVLKRMGAN TKATIDDIDA RINLIEQALP KGVSFEVFYD QADLVDKAVA TVRDALLMAF
VFIVVILALF LVNIRATLLV LLSIPVSIGL ALMVMSYYGL SANLMSLGGL AVAIGMLVDG
SVVMVENIFK HLTQPDRRHL TQARARADGE ADPYHGDEDG GVNADDDDHQ GNMAVRIMLA
AKEVCSPIFF ATAIIIVVFA PLFALEGVEG KLFQPMAVSI ILAMISALLV ALIAVPALAV
YLFKRGVVLK ESVILRPLDN AYRKLLSATL ARPKMVVLSA VIMFVMSMAL LPRLGTEFVP
ELEEGTINLR VTLAPTASLG TSLDVAPKLE ALLLQFPEVE YALSRIGAPE LGGDPEPVSN
IEIYIGLKPI EEWQSASSRL ALQRLMEEKL SVFPGLLLTF SQPIATRVDE LLSGVKAQLA
IKLFGPDLAV LSDKGQVLTD LVAKIPGAVD VSLEQVSGEA QLVVRPDRSQ LARYGISVDQ
VMTLVSQGIG GASAGQVIDG NARYDINLRL AAEFRSSPDV IKDLLLSGTN GAIVRLGEVA
SVEVEMAPPN IRRDDVQRRV VVQANVAGRD MGSIVNDIYA LVPKADLPAG YTVIVGGQYE
NQQRAQQKLM LVVPVSIALI ALLLYFSFGA VKQVLLIMAN VPLALIGGIV ALFVSGTYLS
VPSSIGFITL FGVAVLNGVV LVDSINQRRQ SGESLYDSVY EGTVGRLRPV LMTALTSALG
LIPILVSSGV GSEIQKPLAV VIIGGLFSST ALTLLVLPTL YRWLYRRDKR IDELG
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