| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0491 |
|---|
| Symbol | |
|---|
| ID | 1168362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 514492 |
|---|
| End bp | 516627 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637342486 |
|---|
| Product | M13 family peptidase |
|---|
| Protein accession | NP_716127 |
|---|
| Protein GI | 24372085 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACC GCCTGATCCC CGCCTTATTA CTGTCGACGA CAGTGCTAAC GGGACTATCT
GCCTGTGGTG ACACCACCAA AGATACCGTC GCAACAGTGA GCGGCAATGT CGCTTCAGCC
CAAACCAGCA CTGGCCAAAA CGCCGAACAA GCCAACGCCA TGCCCATCGG CATTAATCTC
GCGGCTATGT CGCCCAAGGT TAAACCCGGT GATGACTTTT ATACCTACGC CAATGGCGAA
TGGATGAAAA CCACAGAGAT CCCTGCGGAT CGCTCAAGCA CGGGGGCGTT TTTAGTCGCT
TTCCAAGAGA CGGAAAAGCA TAAGACCAGC CTGATTGCTG AGTTAGTTAA GGCCGAACAC
GCGGCGGGCA GCGATGAAGC GCGTATCGCC GATTTTTATA AGGCTTTTAC CGATACCGCC
GCCATTGATG CAGCGGGGAT GAAGCCGATG GCAGCCGACT TAGCCCGTTA TCAAGCCATT
ATGGATAAAC AGGGCTTATC GGCGGCGCTC GGGGCGAATC TGCGCGCTGA TGTGGACCCA
CTCAATGCCA CTGATTTTTT CACCGAAAAC CTCTTCGGTA TTTTCGTCAC CCAAGGTTTA
GCTACCCCAG GTGAAGTACT GCCTTACTTT CTCCAAGGCG GTTTAGGATT ACCCGAGCGC
GAATATTATC TCTCGGACGA TCCTAAAATG GTGGAACTAC GCAGCGCTTA CCGCGCCTAT
ATCGAAACCC TGTTAACGGA TGCCGGAATT AGCGATGCCG CTGCCCGTGC CGAGCGCATT
TTTGCCCTCG AGCACAAAAT CGCTGCTGCC CACGCCAGTC GTGAAGACAG CGAAGATTTC
ACTAAGGCAT CGGGTGTATG GAGCCGCGCT GATTTTGATG CCAAAGCCCC TGGTATCGAC
TGGACCGCCT TTTTAGCCGC AGCGCAGCTG GATAAGCAAG GCAAATTTGC CGCCTACCAT
GCCAGTGCCA TTACCAACCT CTCGGCGCTG GTGGCCTCAG AGCCGTTGGA TGCGTGGAAA
GACTGGCTTG TGTTCCACCA TATCAACAGC CATGCGGATG TGTTGCCGTC CAATATTGAT
AATGCGTCGT TTGCCTTTAA TGGCACTAAG CTGTCGGGCA CGCCTGAGCA GCGCAGCCGT
GATAAGCGGG CACTAAGTGC ATTGGATGAG TATTTAGGGG ATGCCGTGGG CCGCGCTTAC
GCCGAGCACT ATTTCCCTGC CTCAGCTAAG GCTGAAGTTA GCACTATGGT CGACAATATC
GTGACTGCCT TTGGCAAGCG CGTCGAAAAA CTAGAGTGGA TGGACCCCTC AACCAAGAAA
GAAGCACTGG CTAAGGTCGC AACCATTGCC GTGGGCGTGG GTTACCCCGA TAAATGGCGT
AATTATGATG CTTACACTGT TTTGCCCACC AATGCCTACG CCAATGCCAT CAATGGTGAG
AAGGTAGAAT ATGCCCATCA ACTCGCCAAA ATCGGCAAAC CTATGGATAA GGGCGAGTGG
TGGATGACGC CGCAAGTCGT CAACGCAGTA AACTTGCCAG TGCAAAACGC GCTTAACTTC
CCCGCGGGGA TTTTACAGCC GCCATTCTTC GATGCGAAGG CCGATGCCGC CTATAACTAT
GGCGCGATTG GTGCTGTGAT TGGCCATGAG ATCAGCCATA GCTTCGATAA TAATGGCGCG
GCCTTCGATT CGACGGGCGC TATGCGTAAC TGGTGGACAC CGGCGGACTT TGCCCAGTTT
GCTAAACAGG GCGAGGCACT GGCGAAGCAA TTTGATGCCT ACGCGCCATT CCCCGATCTG
CATGTCAACG GCAAGCTGAC CTTAGGCGAA AACATTGCCG ACGTAGCGGG CTTAGCGGCT
GCACTCGATG CCTACCATGC CTCACTTAAC GGCAAGCCTG CACCGGTTAT CGATGGCTTT
ACTGGCGATC AACGCTTCTT TATCGGTTTT GCGCAAACCT GGGCGACCAA GATGCGTGAC
GAGGCTTTGC GTGCCCGCGT GGCGACCGAT GGTCATGCCC CCGGCATGTA TCGCGCGCTA
ACGGTGCGTA ACTTAGATGC GTGGTACACA GCATTCGATG TGAAGCCCGG CGATAAGCTG
TACTTAGCAC CAGAGGAACG GGTAAAAATC TGGTAA
|
|---|
| Protein sequence | MSDRLIPALL LSTTVLTGLS ACGDTTKDTV ATVSGNVASA QTSTGQNAEQ ANAMPIGINL
AAMSPKVKPG DDFYTYANGE WMKTTEIPAD RSSTGAFLVA FQETEKHKTS LIAELVKAEH
AAGSDEARIA DFYKAFTDTA AIDAAGMKPM AADLARYQAI MDKQGLSAAL GANLRADVDP
LNATDFFTEN LFGIFVTQGL ATPGEVLPYF LQGGLGLPER EYYLSDDPKM VELRSAYRAY
IETLLTDAGI SDAAARAERI FALEHKIAAA HASREDSEDF TKASGVWSRA DFDAKAPGID
WTAFLAAAQL DKQGKFAAYH ASAITNLSAL VASEPLDAWK DWLVFHHINS HADVLPSNID
NASFAFNGTK LSGTPEQRSR DKRALSALDE YLGDAVGRAY AEHYFPASAK AEVSTMVDNI
VTAFGKRVEK LEWMDPSTKK EALAKVATIA VGVGYPDKWR NYDAYTVLPT NAYANAINGE
KVEYAHQLAK IGKPMDKGEW WMTPQVVNAV NLPVQNALNF PAGILQPPFF DAKADAAYNY
GAIGAVIGHE ISHSFDNNGA AFDSTGAMRN WWTPADFAQF AKQGEALAKQ FDAYAPFPDL
HVNGKLTLGE NIADVAGLAA ALDAYHASLN GKPAPVIDGF TGDQRFFIGF AQTWATKMRD
EALRARVATD GHAPGMYRAL TVRNLDAWYT AFDVKPGDKL YLAPEERVKI W
|
|---|
| |