| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0467 |
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| Symbol | uvrD |
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| ID | 1168340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 490777 |
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| End bp | 492945 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342464 |
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| Product | DNA-dependent helicase II |
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| Protein accession | NP_716104 |
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| Protein GI | 24372062 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT AGACGGCCTG AATGATAAAC AGCGCGAGGC TGTCGCGGCA
CCGCAATCTA GCATGTTAGT GCTTGCGGGG GCGGGCAGTG GTAAAACGCG GGTGTTAACT
CACCGTATCG CGTGGTTAAT GCAGGTTGAA CAGCAGAGTC CTTACTCGAT TTTAGCCGTG
ACGTTTACCA ATAAAGCCGC GGCTGAGATG CGCGAGCGGG TTGAAAAAGT CGCTGGCACC
AATATGGGGC GGATGTGGAT TGGCACCTTC CACGGGCTGG CGCATCGTTT ATTACGCACT
CACTTCCAAG ATGCGGGACT ACCGCAAAGC TTCCAAATTC TTGATTCGGA CGATCAGCTG
CGTTTGCTGA AACGCATCCT TAAAAGTTTG AATCTGGATG AAAAACAATA TCCTCCTCGT
CAGGCGCAGG GTTATATCAA TGGTAAAAAA GACCAAGGAT TACGGCCTAA GCATATCGAT
GCGGGTGGTT TTCCGATTGA GCAAAACCTG CTGAAGATTT ATCAGGTTTA TCAAGAGTCT
TGCGATCGCG CTGGCCTTGT CGATTTTGCC GAAATCCTAT TACGTGCCCA CGAGCTTTGG
CTCAATAAGC CGCATTTGCT GGCGCATTAT CAAGAACGTT TTAAGCATAT TCTGGTGGAC
GAGTTCCAAG ATACCAACGC CATTCAATAC GCTTGGATCC GCATGCTAGC CGGCCAAACC
GCCAATGTGA TGATCGTCGG TGACGACGAC CAATCCATTT ACGGTTGGCG CGGCGCTCAG
GTTGAAAACC TGCACCGCTT CCTGAAGGAT TTCCCGACGG CGACCACGAT TCGCCTCGAA
CAAAATTATC GCTCCAAGGG CAATATTTTG AAGGCGTCAA ATGCCCTTAT TGCCAATAAC
CCCGAGCGTT TAGGTAAAGA GCTGTGGACC GACGAAGCCG ATGGTGAGCC GATTTCCCTC
TACTGCGCCT TTAACGAAAT GGACGAAGCG CGCTTTATTG TCGGCCGGAT CAATGATTGG
TACGAAAAAG GCGGCAATTT AAGTGACTGC GCGATTTTAT ATCGCTCGAA TGCCCAGTCG
CGCGTGCTCG AAGAAGCCTT ATTACACAAA GGCTTAGCCT ATCGGATTTA CGGTGGTTTG
CGCTTTTTCG AACGCCAAGA GATTAAAGAC GCGATGGGTT ATATGCGTCT AATCAGCAAT
AAAAATGACG ATGCCGCCTT CGAGCGCGTG GTTAATACAC CGCCCCGAGG CATTGGCGAT
CGCACTCTAG ATATTTTACG CACTACCGCG CGCCAGCAAG AGCTCACGTT ATGGCAAGCG
TGTTTACGGC TGCTGGATGA AAAAGTGCTC GCGGGCCGAG CCGCCTCAGC GGTGCGTGGC
TTTATGGATC TTATCGTCAC CCTGCAGGAA GACACTCAAG ATATGGCGCT GTACCGGATG
GCGGACACAG TGATCCAAGC TTCTGGCCTT AAAGCTATGT ACGAAGCAGA AAAGGGCGAA
AAGGCCCACG CTCGTATCGA AAACTTAGAG GAACTCGTCA CCGCCGCGCG CACCTTCGAA
ATGCCTGAAG AGCTTGAGGA TATGGGCGAG CTGAATGCCT TTTTATCCCA TGCGGCCTTA
GAGGCGGGCG AAGGTCAGGC CGATGCCTTT ACCGATGCAG TGCAACTGAT GACTCTGCAC
TCGGCCAAGG GGCTGGAGTT TACTATGGTA TTTATGGCGG GTGTCGAGGA GGGGATTTTC
CCGAGTAAGA TGGCGCTCGA AGAGGGCGAC AGACTCGATG AGGAACGCCG CCTCTGTTAC
GTGGGCATGA CCCGCGCGAT GGAAAAACTC TATATCACCT ATGCCGAATC TCGGCGGATT
TATGGCCGTG AAGATTATGC TCGGCCATCG CGTTTTATTA AGGAAATCCC GCCGCAATAT
GTGGACGAGA TCCGCTTAAA GGCGCAGGTG TCGACACCGA TGGCCAATAA TCGTTTTAGT
ACCCAAAAAT CGGCGGTTGC CAACGATACC GGCTTTAGCG TCGGCCAAAG AGTGCATCAT
CCTAAATTTG GCGATGGCAA AGTGACTAAC TTTGAAGGCA GTGGCGCACA GGCGCGGGTA
CAGGTGAATT TTAGCGATTT TGGCAGCAAA TGGTTGGTGG TCGCTTACGC CCGCTTAGAG
GCGCGTTGA
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| Protein sequence | MDVSSLLDGL NDKQREAVAA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVAGT NMGRMWIGTF HGLAHRLLRT HFQDAGLPQS FQILDSDDQL
RLLKRILKSL NLDEKQYPPR QAQGYINGKK DQGLRPKHID AGGFPIEQNL LKIYQVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QERFKHILVD EFQDTNAIQY AWIRMLAGQT
ANVMIVGDDD QSIYGWRGAQ VENLHRFLKD FPTATTIRLE QNYRSKGNIL KASNALIANN
PERLGKELWT DEADGEPISL YCAFNEMDEA RFIVGRINDW YEKGGNLSDC AILYRSNAQS
RVLEEALLHK GLAYRIYGGL RFFERQEIKD AMGYMRLISN KNDDAAFERV VNTPPRGIGD
RTLDILRTTA RQQELTLWQA CLRLLDEKVL AGRAASAVRG FMDLIVTLQE DTQDMALYRM
ADTVIQASGL KAMYEAEKGE KAHARIENLE ELVTAARTFE MPEELEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFTMV FMAGVEEGIF PSKMALEEGD RLDEERRLCY
VGMTRAMEKL YITYAESRRI YGREDYARPS RFIKEIPPQY VDEIRLKAQV STPMANNRFS
TQKSAVANDT GFSVGQRVHH PKFGDGKVTN FEGSGAQARV QVNFSDFGSK WLVVAYARLE
AR
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