| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0432 |
|---|
| Symbol | acnB |
|---|
| ID | 1168310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 455780 |
|---|
| End bp | 458377 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637342434 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | NP_716069 |
|---|
| Protein GI | 24372027 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGAAG CATATCGTAA ACACGTCGCA GAACGTGCTG CAGAGGGCGT AGTCCCTAAG
CCATTAGATG CACATCAAGT GGCTGAACTG GTTAAATTGG TTCAAAATCC CCCCGCTGGT
GAAGAAGCGT TTGTTCTTGA CCTGCTCGAA AATCGAATTC CCCCCGGTGT TGACGAAGCG
GCTTACGTTA AAGCTGCATT CTTAGATGCG GTTGCTAAAG GCACTGCAAC TTCACCAATC
CTGTCTGCCG AACGTGCTAC TGAATTACTT GGCACTATGC AAGGTGGTTA TAACATCGAG
CCGTTAATTG CACAGCTCGA TAACCCTGCG CTAGCGCCAT TAGCCGCTAA AGCGCTAGCT
CACACTCTGT TGATGTTTGA TTCTTTCCAC GATGTGGTTG AGAAGATGGA AGCGGGCAAT
CAGTTTGCTA AGCAAGTGGT TGAAGCTTGG GCAAATGCAG ACTGGTACTT AAGTCGTCCA
AAATTAGCTG ACAAAGTGAC CCTGACGGTA TTTAAAGTCT CCGGTGAAAC CAACACAGAT
GACCTGTCAC CTGCACCCGA TGCTTGGTCT CGTCCAGATA TCCCATTGCA CGCATTAGCT
ATGCTGAAAA ACGCGCGTGA TGGCATCGAG CCAGATGTTG CTGGCAGCGT AGGTCCAATC
AAGAAATTAG AAGAACTAAA AACCAAAGGT TTCCCATTAG TTTATGTGGG TGACGTAGTT
GGTACGGGTT CATCACGTAA GTCAGCGACT AACTCAGTAC TGTGGTTCAT GGGTGATGAT
ATCCCATTCG TCCCTAACAA ACGTGCTGGT GGTTTCTGCT TAGGTGGCAA GATTGCACCG
ATTTTCTTCA ACACGATGGA AGATGCGGGC GCTCTGCCAA TCGAACTTGA CGTTAGCAAA
ATGGAAATGG GCGATGTGAT CGACATTTAC CCATACGCTG GTGTGGTTAA GCGTCATGGC
TCAGATGAAG TGATTTCTGA GTTCAGCCTG AAAACCGACG TACTGTTAGA CGAAGTGCGT
GCAGGTGGTC GTATTCCACT GATCATTGGT CGTGGTTTAA CTGACAAAGC ACGCGCTGTG
TTAGGTTTAC CAGCCTCTGA GGTGTTTGTT CGTCCTCAAG ACATCGCTGA TAATGGCAAA
GGTTATACCC TTGCACAGAA GATGGTCGGT AAAGCTTGTG GTGTTGCTGG CGTGCGTCCA
GGGCAATACT GCGAACCTAA GATGACGTCT GTGGGTTCAC AGGACACTAC CGGTCCTATG
ACCCGTGACG AGCTGAAAGA CTTAGCCTGT TTAGGCTTCA GTGCCGATTT GACTATGCAG
TCATTCTGCC ACACTGCAGC GTATCCAAAA CCCGTTGACG TGAACACGCA TCACACGCTG
CCAGACTTCA TCATGAACCG TGGCGGTGTG TCGCTACGCC CTGGTGACGG TGTTATTCAC
TCATGGTTAA ACCGTATGCT CCTGCCTGAT ACCGTCGGTA CTGGTGGTGA CTCTCATACG
CGTTTCCCAA TTGGTATTTC ATTCCCTGCG GGTTCTGGCC TAGTCGCATT TGCTGCTGCG
ACTGGTGTAA TGCCGCTGGA CATGCCTGAA TCAGTATTAG TGCGCTTCAA AGGTAAGATG
CAACCTGGTA TCACCCTGCG TGATCTAGTA CATGCGATTC CATTAAAAGC TATTGAACTG
GGCATGTTGA CTGTTGAGAA GAAAGGTAAG GTGAACATCT TCTCTGGTCG TGTACTGGAA
ATCGAAGGCT TAGAATCCCT GAAAGTTGAA CAGGCATTCG AACTGTCTGA CGCCTCAGCA
GAGCGTTCTG CGGCGGGTTG TACCATCAAG TTAGACAAAG AGCCAATCAT CGAGTATCTG
AACTCGAACA TCACTATGCT TAAGTGGATG ATCGCTGAAG GTTATGGCGA CCGTCGTACA
ATAGAGCGTC GTATCAAAGG CATGGAAGAG TGGTTAGCCA ATCCTGAGCT GATGAGTGCT
GACGCTGATG CCGAATACAC TGCTGTGATC GAAATCGATC TGAACGAGAT CAAAGAACCT
ATCCTATGTG CGCCTAACGA TCCTGATGAT GCCGTATTAC TGTCATCTGT TGCGCAAACT
AAGATTGACG AAGTGTTTGT CGGTTCTTGT ATGACTAACA TCGGTCACTT CCGTGCGACC
GGTAAGATGT TAGACAAGTT TGCTAAGACA CTGCCAACAC GTTTGTGGAT TGCACCACCG
ACTAAGATGG ATAAAGATCA ACTGACCGAA GAAGGTTACT ACGGTATTTT CGGCCGCGTC
GGTGCGCGTA TCGAAATCCC AGGTTGTTCA CTGTGTATGG GTAACCAAGC ACGAGTGGCC
GAAGGTGCAA CTGTGGTTTC TACTTCTACC CGTAACTTCC CGAATCGCTT AGGTACAGGC
GCTAACGTTT ACTTAGCTTC TGCGGAATTA GCGGCAGTAG CAGCACTGTT AGGTCGTCTG
CCAACGGTAG AAGAGTACCA AGAATACGCT AAAGAGTTAG ACGCAACTGC AGCTGACACT
TACCGTTACT TGAACTTCGA TCAAATCGAT TCTTACACCA AGAAAGCATC GCAAGTGATC
TTTCAATCAG CTGTATAA
|
|---|
| Protein sequence | MLEAYRKHVA ERAAEGVVPK PLDAHQVAEL VKLVQNPPAG EEAFVLDLLE NRIPPGVDEA
AYVKAAFLDA VAKGTATSPI LSAERATELL GTMQGGYNIE PLIAQLDNPA LAPLAAKALA
HTLLMFDSFH DVVEKMEAGN QFAKQVVEAW ANADWYLSRP KLADKVTLTV FKVSGETNTD
DLSPAPDAWS RPDIPLHALA MLKNARDGIE PDVAGSVGPI KKLEELKTKG FPLVYVGDVV
GTGSSRKSAT NSVLWFMGDD IPFVPNKRAG GFCLGGKIAP IFFNTMEDAG ALPIELDVSK
MEMGDVIDIY PYAGVVKRHG SDEVISEFSL KTDVLLDEVR AGGRIPLIIG RGLTDKARAV
LGLPASEVFV RPQDIADNGK GYTLAQKMVG KACGVAGVRP GQYCEPKMTS VGSQDTTGPM
TRDELKDLAC LGFSADLTMQ SFCHTAAYPK PVDVNTHHTL PDFIMNRGGV SLRPGDGVIH
SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM
QPGITLRDLV HAIPLKAIEL GMLTVEKKGK VNIFSGRVLE IEGLESLKVE QAFELSDASA
ERSAAGCTIK LDKEPIIEYL NSNITMLKWM IAEGYGDRRT IERRIKGMEE WLANPELMSA
DADAEYTAVI EIDLNEIKEP ILCAPNDPDD AVLLSSVAQT KIDEVFVGSC MTNIGHFRAT
GKMLDKFAKT LPTRLWIAPP TKMDKDQLTE EGYYGIFGRV GARIEIPGCS LCMGNQARVA
EGATVVSTST RNFPNRLGTG ANVYLASAEL AAVAALLGRL PTVEEYQEYA KELDATAADT
YRYLNFDQID SYTKKASQVI FQSAV
|
|---|
| |