| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0423 |
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| Symbol | pdhR |
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| ID | 1168301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 437566 |
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| End bp | 438318 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342425 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | NP_716060 |
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| Protein GI | 24372018 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTATA GCAAAATAAA TCAGCCAAAA ATTTCTGATG TGATCATGGC GCAACTCGAG
CAAATGATCC TCGAGGGCAG CTTACAGCCT GGCCAAAAAT TGCCGCCGGA GCGTGAACTG
GCTATCCAGT TTGAAGTGTC TCGCCCCTCA TTGCGTGAAG CCATTCAAAA GCTTGAGGCG
AAAGGGTTGT TAATGCGCCG TCAAGGCGGT GGCACCTATG TTAAAGAACA ACTCTGGCAG
AGTCTTGCCG ATCCAATCGT TGAATTAATG ACTGCCGATC CAGAAAGTCA GTACGATTTG
CTGGAGTTCC GTCATGCAAC TGAAGGCATG ATGGCCTATT TTGCCGCGCT GCGTGGCACC
GACGCCGATA TGCAGAATAT CAAGCGTATG ATCCTTGAGG TGGAAGCCGC CACCAATATC
GAACAACAAG CTGCTGCCAT TGTGCGTTTC TACCGTGCCG TCGCTGAAGC GTCACACAAT
GTGGCTATGT TGCATCTCGT ACTCAGTTTA ACCCCTGTGC TGCATAAGAA TGTGGCGCAA
AACTTGGAGC TTTTAAGCCG CCGCGAAGAA GCTTCCACTA TGGCTAACGA TCACAGACGA
GCGCTGCTCG CTGCAATCGT TCGTCGTGAT CCCGAAGCCG CTAGAGAAGC CTCGAATGAA
CACTTAAGTT ACATTGAAGA GGTGATGTTA TCTGTGCGGG AAGAAGATAG CCGGTTGCAG
CGAAGTTTGC GCCGTTTAAA GAGTGGCGCT TAA
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| Protein sequence | MAYSKINQPK ISDVIMAQLE QMILEGSLQP GQKLPPEREL AIQFEVSRPS LREAIQKLEA
KGLLMRRQGG GTYVKEQLWQ SLADPIVELM TADPESQYDL LEFRHATEGM MAYFAALRGT
DADMQNIKRM ILEVEAATNI EQQAAAIVRF YRAVAEASHN VAMLHLVLSL TPVLHKNVAQ
NLELLSRREE ASTMANDHRR ALLAAIVRRD PEAAREASNE HLSYIEEVML SVREEDSRLQ
RSLRRLKSGA
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