| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0414 |
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| Symbol | pilD |
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| ID | 1168291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 428993 |
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| End bp | 429919 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342416 |
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| Product | type 4 prepilin-like proteins leader peptide processing enzyme |
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| Protein accession | NP_716052 |
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| Protein GI | 24372010 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT TTTTCACTTT ATTGGGTCAC ACCTTTGACC AAGCACCATG GCTTTTTATC
TCATTAAGTT TTGTGTTTGC GGCCACCATT GGCAGCTTTT TAAATGTGGT GATTCACCGT
TTTCCGGTGA TGATGAAACG CGAATGGCAG CAGGAATGTA ATCAGTATTT GCAGGAATAT
CATGCCGATA TTGTTAAGCA AGTGGGTATC GATAAGCTCA GTAAAGCGAT AGATCACTAT
CCTCCAAAAT ACAATCTCGT GGTGCCAGGC TCCGCTTGCC CTAAATGTAA AACCGCCATC
AAACCTTGGC ATAATTTACC GATGTTAGGC TGGTTAATGT TGCGAGGAAA ATGCGCCGCC
TGTAGCGCGC CAATCTCAGC CCGTTACCCC ATTATTGAAT TAATAACCGG TTTACTGGTT
GCGACATTGG CTTGGCATTT TGGCCCAAGC TGGCAATTTG TGTTTGCTGC AATCCTCACT
TTTGTGTTGA TTGCGCTGAC GGGAATCGAT CTGGATGAAA TGCTGTTACC CGATCAGATG
ACCCTTCCCC TGCTGTGGTT AGGGCTACTC ATCAACCTAA ACCATACCTT TACCAGCCCA
GCCGATGCGA TGATTGGTGC GGCAGCTGGC TATTTAAGTT TGTGGTCGAT TTTTTGGCTG
TTTAAGCTGT TAACTGGCAA AGAGGGCATG GGTTATGGTG ACTTTAAACT ACTCGCCGTA
TTTGGTGCTT GGCTAGGCTG GCAAATGTTG CCGCTGGTCA TTTTACTTTC ATCCTTGGTT
GGCGCCTTCG TTGGCATCAC GCTGATCGTG ACCAAGCGTA ATCAGCTTGC TAACCCGATT
CCCTTTGGTC CTTACATTGC CGCCGCAGGC TGGATCGCCC TAATATGGGG CCAACCTATA
GTGGATTGGT ATTTAAGTAC GTTATAG
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| Protein sequence | MTEFFTLLGH TFDQAPWLFI SLSFVFAATI GSFLNVVIHR FPVMMKREWQ QECNQYLQEY
HADIVKQVGI DKLSKAIDHY PPKYNLVVPG SACPKCKTAI KPWHNLPMLG WLMLRGKCAA
CSAPISARYP IIELITGLLV ATLAWHFGPS WQFVFAAILT FVLIALTGID LDEMLLPDQM
TLPLLWLGLL INLNHTFTSP ADAMIGAAAG YLSLWSIFWL FKLLTGKEGM GYGDFKLLAV
FGAWLGWQML PLVILLSSLV GAFVGITLIV TKRNQLANPI PFGPYIAAAG WIALIWGQPI
VDWYLSTL
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