Gene SO_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0330 
Symbol 
ID1168207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp332721 
End bp334175 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content50% 
IMG OID637342334 
Producthypothetical protein 
Protein accessionNP_715970 
Protein GI24371928 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCA AACAGGATTT TTTCACCCAA TTGCCTGAGT TTTATTCCCA AGTTTATCCG 
CAGGGGATTA GCAATCCCCA TTGGCTTGCT TGGAGTGACG ATGCTGCGGC GTTAATTGGT
TTGCATCAGC CAACAGATGA GTTATTACAG GGCTTATCGG GTAACGCGGC TGTTGAAGGT
GCAAGCTATT ATGCACAGGT TTATAGCGGG CATCAGTTTG GTGGTTACAC TCCTCGATTA
GGTGATGGCC GCTCAATTAT CCTCGGTGAA GCGATTGGCC CTAATGGTGC GTGGGATGTG
GCGCTTAAAG GTGGCGGTCC GACGCCTTAT TCTCGCCATG GTGATGGTCG GGCTGTAATG
CGCTCAGCGG TGCGTGAATT TTTAGTCTCC GAAGCGCTGC ATCATTTAGG TGTGCCGACA
ACCCGTGCCT TGGCTGTGAT TGGCTCAGAT ATGCCCGTTT GGCGCGAGAG CCAAGAAACC
GCAGCCATTA CCGTACGTTT GGCACGCAGT CATATCCGTT TCGGTCATTT CGAATTTTTC
AGCCATAGCG AGCGTGGCCA AGCTGATAAG CTGACGCAGC TGCTCAACTT TACCTTGAAG
CAGCATTATC CGCATTTGAG CTGTGATCCT GCGGGTTATA AAGCCTGGTT TTTACAAGTG
GTGCAAGATT CCGCCAAGAT GATCGCCCAT TGGCAGGCAA TCGGTTTTGC CCATGGGGTA
ATGAACACCG ATAATATGTC GATTCTTGGT GATAGTTTCG ATTTTGGCCC CTTTGCCTTC
CTCGATACCT TCCAAGAAGA CTTTATTTGT AATCATTCAG ACCCCGATGG ACGTTACGCC
TTTGGCCAGC AACCCGGTAT TGGTCTGTGG AATTTGCAAC GTTTAGCGCA GGCGTTGACA
CCTGTGATTG CCTCCGATGA TTTAATCGCT GCCCTGAATC AATATCAACA CGCCTTAGTG
CAGCATTATT TGGCGCTGAT GCGCGCTAAG TTGGGGTTAG TGCAGCAAGC TGATTCAAGT
GCAGAGCAGG ATCAGCAGGA CTTAGAACTC ATTGGCCGCT TTACCGTGTT GATGGAGAAA
AATCAGCTCG ATTACAGCCA TACTTGGCGT CGCTTCGGCC AGCTTGATCC CAGTAGTTTA
CACTCGAGCC TGCGGGATGA TTTTATCGAT CTCAACGAGT TTGATGCTTG GTATCAGGTG
TATCAGGCGC GGCTTGGAAA GGTGACCGAT GTCGAGGCGT GGCAACAGCA GTGTAATCGA
GTCAATCCCA AGTATATTTT GCGTAACTAT TTGGCCCAAG AGGCGATTAT CGCGGTAGAT
GAGGGCAATT TAGCGCAGCT ACAGCGTTTA CATCAGGTAT TGCGCCAGCC TTTTACCGAG
CAAATTGAGC ATGAGGAGCT GGCCAAGCGT CCACCCGATT GGGGGCAAGG GCTGATCATG
TCATGCAGCA GTTGA
 
Protein sequence
MKFKQDFFTQ LPEFYSQVYP QGISNPHWLA WSDDAAALIG LHQPTDELLQ GLSGNAAVEG 
ASYYAQVYSG HQFGGYTPRL GDGRSIILGE AIGPNGAWDV ALKGGGPTPY SRHGDGRAVM
RSAVREFLVS EALHHLGVPT TRALAVIGSD MPVWRESQET AAITVRLARS HIRFGHFEFF
SHSERGQADK LTQLLNFTLK QHYPHLSCDP AGYKAWFLQV VQDSAKMIAH WQAIGFAHGV
MNTDNMSILG DSFDFGPFAF LDTFQEDFIC NHSDPDGRYA FGQQPGIGLW NLQRLAQALT
PVIASDDLIA ALNQYQHALV QHYLALMRAK LGLVQQADSS AEQDQQDLEL IGRFTVLMEK
NQLDYSHTWR RFGQLDPSSL HSSLRDDFID LNEFDAWYQV YQARLGKVTD VEAWQQQCNR
VNPKYILRNY LAQEAIIAVD EGNLAQLQRL HQVLRQPFTE QIEHEELAKR PPDWGQGLIM
SCSS