Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0297 |
Symbol | |
ID | 1168179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 303044 |
End bp | 303610 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342306 |
Product | putative lipoprotein |
Protein accession | NP_715937 |
Protein GI | 24371895 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATATG CTGCCCCACT GTTAATGGTT TGCATGCTGC TGCAGGGTTG CGCCGGTGCC GTTATGGTGG GCGCAGTCAG CGGCGCCATG ATGGCCAACG ACGAGCGTTC AGTGAAGACA CAGCTCGATG ATACTAATAC CGATTTCAAG ATCACCAGTG CGCTACTTGA GCATGAAGAT CTTAAGAAAC AAACCAATAT CACAGGTGTG TCGGTAAACG GTAATGTGCT GATGATAGGC CAAGCCCCCA ACTCAATGCT GAGGGATAAA GCAGTTAAAG TCGTACAAGA CCTTAAGCTT GGCGGTAAAA TCCACAATCA GATCCGCATC GGTAATCCAA CGTCTTTCAC GACTCGCAGT AACGACACTT GGGTAACAAC CAAAGTAAAG GGCCGGATGC TCAACGAGAA AGCACTAGAT GTGACACGGA TTAAAGTGAT CACTGAAAAC GGTGAAGTCT TCCTGCTAGG ACTTATTCAC CGCTCACAGG CAGAACTGGC TGTCGACATC GCCCGTAATA CCGCGGGCGT GCGCAAAGTC GTTAAAGTGT TCGAATATAT CGAATAA
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Protein sequence | MRYAAPLLMV CMLLQGCAGA VMVGAVSGAM MANDERSVKT QLDDTNTDFK ITSALLEHED LKKQTNITGV SVNGNVLMIG QAPNSMLRDK AVKVVQDLKL GGKIHNQIRI GNPTSFTTRS NDTWVTTKVK GRMLNEKALD VTRIKVITEN GEVFLLGLIH RSQAELAVDI ARNTAGVRKV VKVFEYIE
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