| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0237 |
|---|
| Symbol | rpsC |
|---|
| ID | 1168120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 248967 |
|---|
| End bp | 249659 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637342244 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | NP_715877 |
|---|
| Protein GI | 24371835 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAGA AAGTACATCC TAATGGTATC CGTCTGGGTA TCACCAAGCC TTGGATCTCT
ACCTGGTACG CAGATAAGTC AGATTATGCA AATAACCTGA ACAGCGACTG GGAAGTGCGT
AAGTATCTTG CAGACAAACT GCAAGCTGCG TCAGTATCTA AGATTGTTAT TGAACGCCCA
GCGAAAAGCA TCCGCGTTAC TATTCACACT GCCCGTCCAG GCGTTGTGAT CGGTAAGAAA
GGTGAAGACG TTGAAGTATT GCGTGCTGCA GTTTCAAAAC TGGCTGGCAC TCCTGCTCAA
ATTAACATCG CTGAGATCCG TAAACCTGAG CTAGATGCCA AGTTAGTTGC TGACTCTATT
GCACAGCAAT TAGAGCGCCG TGTTATGTTC CGTCGCGCGA TGAAGCGTGC GGTACAAAAC
GCAATGCGTA TTGGTGCTCA AGGTATCAAA GTTGAAGTTA GTGGCCGTTT AGGCGGTGCT
GAGATTGCGC GCTCTGAGTG GTACCGTGAA GGTCGTGTAC CTTTGCACAC ACTGCGTGCT
GATATCGACT ATTCAACCTC TGAAAGTCAC ACTCAATACG GTGTGATTGG TATTAAAGTT
TGGATCTTCA AAGGTGAAGT TCTGGACGGA ATGCTGCCAC AGATTGAAGA GCCGAAACAG
CAGCAACCTA AGCGCAAGCC TCGTGGTAAA TAG
|
|---|
| Protein sequence | MGQKVHPNGI RLGITKPWIS TWYADKSDYA NNLNSDWEVR KYLADKLQAA SVSKIVIERP
AKSIRVTIHT ARPGVVIGKK GEDVEVLRAA VSKLAGTPAQ INIAEIRKPE LDAKLVADSI
AQQLERRVMF RRAMKRAVQN AMRIGAQGIK VEVSGRLGGA EIARSEWYRE GRVPLHTLRA
DIDYSTSESH TQYGVIGIKV WIFKGEVLDG MLPQIEEPKQ QQPKRKPRGK
|
|---|
| |