Gene SO_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0206 
SymboltrmA 
ID1168091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp213570 
End bp214670 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID637342206 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionNP_715847 
Protein GI24371805 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG CAGCAATGGA TCCCACAACC TATGATGCGC AGTTAGAGGC AAAGCGTATC 
AAGCTTGAGC AAGCCTTTGC CCAATTTGAG ACACCGAGTA TTGAAGTGTT TGCCTCTGAC 
CCAGAGCATT ATCGAATGCG TGCCGAGTTT CGCGTATGGC ATGAAGGTGA CGATTTATAC 
TATTACATGT TCGATAAGGC ATTAAATGAT AAGGTTCGCT GTGACCAATA TCTGCCTGCA 
AGCACCTTAA TCAATGAGAT GATGGCGGCC TTAATTGCCG AGCTAAAACC TAACCCCAGT 
CTGCGTCACA AACTCTTCCA AGTAGATTTT TTATCTACAT TGAGTGGCGA GATTTTAGTG 
TCACTGCTGT ATCACAGACA GCTTGATGAC CAATGGCGCG CAGAAGCAAT AGCACTTAAA 
GCCAAACTGA GTAGCCAATT TAAGGTCAAT ATCATCGGCC GTGCCCGTAA GCAAAAAATC 
GATTTAGATA AAGACTTTGT GGTTGAGTCA CTGCAAGTCA ACGACAAAGT GTTTCACTAT 
AAACAAATTG AGAACAGCTT CACCCAACCC AATGCCAAAG TAGCGATCAA GATGTTGGAG 
TGGGCGATTG ATGTGACTCA AAATAGCCAA GGGGATTTGC TCGAGCTGTA TTGTGGTAAT 
GGCAACTTCT CTATCGCACT GGCGCAAAAC TTTAATCGCG TGTTAGCCAC AGAACTGGCC 
AAGCCTTCAG TGGATGCAGC ACAGTACAAT ATCGAAATCA ACGGCATTGA TAATCTGCAA 
ATTATTCGCA TGTCAGCGGA AGAATTTAGT GATGCGATGG CCAAAAAGCG CAGCTTCAGG 
CGTTTAGAAG GCATCGATCT GGATAGCTAT CTCTGCAACA CTATTTTTGT TGACCCCCCA 
AGAGCTGGTA TCGACCCTGC CACATTGGAC TTAGTGCAAG GTTATGAGCG GATTTTGTAT 
ATCTCGTGCA ATCCCGACAC CTTAAAAGAC AATTTGCAGC AATTGTATAA GACTCACAAG 
GTGACTCGTT TTGCGCTATT CGATCAGTTC CCTTACACCG ACCATATGGA AACAGGTGTA 
CTGCTAGAGC GCATTAAGTA A
 
Protein sequence
MNLAAMDPTT YDAQLEAKRI KLEQAFAQFE TPSIEVFASD PEHYRMRAEF RVWHEGDDLY 
YYMFDKALND KVRCDQYLPA STLINEMMAA LIAELKPNPS LRHKLFQVDF LSTLSGEILV 
SLLYHRQLDD QWRAEAIALK AKLSSQFKVN IIGRARKQKI DLDKDFVVES LQVNDKVFHY 
KQIENSFTQP NAKVAIKMLE WAIDVTQNSQ GDLLELYCGN GNFSIALAQN FNRVLATELA 
KPSVDAAQYN IEINGIDNLQ IIRMSAEEFS DAMAKKRSFR RLEGIDLDSY LCNTIFVDPP 
RAGIDPATLD LVQGYERILY ISCNPDTLKD NLQQLYKTHK VTRFALFDQF PYTDHMETGV 
LLERIK