Gene SO_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0194 
Symbol 
ID1168080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp203016 
End bp204878 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content48% 
IMG OID637342196 
Productacyltransferase family protein 
Protein accessionNP_715836 
Protein GI24371794 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTAA CAAAACGTTT TTTACCGTAT TTTGCGACTC AATGCCTTGG CGCACTTAAT 
GACAATATCT ACAAAAATGT GCTGTTGTTA TTGGTGACCT TTAGCCAAGT CAATAACCTC
CCTATTAGTG TCGATATGTT TGTCAATTTG GCTGCTGGGG TGTTTATTTT GCCGTTTTTC
CTGTTCTCGG CCCATGCGGG TGTGGTGGCC GACAATATGG ATAAAGCGAA ACTTATCCGT
CGATTAAAAT TGCTCGAAGT CATCATTATG TTCAGCGCCG CACTTGCCAT TGTGAGCGAG
AATTACATGA TGATGTTATT GCTGCTGTTT TTAACTGGCA GTCAGTCTGC CTATTTTGGC
CCAGTCAAAT ATTCACTGTT ACCTCAAGCT TTAAAGGAAG ATGAGTTAGT CACAGGTAAT
GCGTGGGTTG AGATGGGGAC ATTTCTCTCA ATCTTGATTG GTACCTTGGG TGCGGGGATT
TTAGTCTCTG ACAACAATGC GACCCTTTGG TCGGCACTCA CGGTGGCAGC TCTCGCTTTA
GCAGGTTATT TATCTAGCCG AGCTATTCCC GCTTTACCGC CGCAGGGCGC AGTGCAAAAG
ATTCCTTTTC GGCCATTATC GGGTACGTGG CGCTCGATTC AAAAAGCGCG CCAAACGCCT
TCAATTTGGA TGGCGATCCT CGCCATTAGT TGGTTCTGGT TTTTGGGCGC GACGTATCTG
ACCCAATTCC CTAACTTTGC CAAGTTGCAT CTGCATTCTG GCGCGACTGT AGTGTCGCTG
TTGCTGGGGA TGTTCTCTAT CGGGATTGCA GTAGGTTCGT TTGTCTGTGA GCGTTTTTCC
TTTGGACATG TGGAATTAGG TTTGCTGCCT TTTGGGGTGC TCGGGTTAAC CGTGTTTGGA
GTGGATCTGC TGTGGGCGAT TCCGCCAGCA CCTGCGGATG CAAGTTTTGT CTATGGCTTA
CAAACTTTTA TTGCCCAATC ACAACATTAT CGTGTGATGC TGGATTTCTT TATGATTGGC
GTCAGTGGCG GTTTGTTTAT TGTGCCTCTG TACGCCTTTA TTCAAACCCG CTCCGCGAAG
GGGGAATGTG CGCAGGCGAT TGCCGCGAAT AACATTATGA ACTCGCTGTT TATGGTGGCT
TCGGCGTTGT TGTCTATGTT GCTGCTTGGG GTGGCTGGCT GGAGTATTCC GCAGTTGTTC
TTACTGCTAG CGGTGATGAA TTTCGTTGTT GCTCTCTATG TGTATTCACA AGTGCCTGAG
TTTACGCAGC GATTTATCAG TTATTTACTG AGCCATGTGC TGTATCGTGT GACAGTGACT
GGGCGGGATA AGATCCCTAA AGAAGGTGCA GGCATTATCG TCAGTAACCA TGTGAGTTAT
GTCGATGCGC TGATCATTAT GGGAGCTTCA ACTCGACCGA TTCGATTTGT GATGGATAAA
TCGATCAGTG AAATCCCAGT GCTAAAGTAT TTATTCCGCC ATGCGGGAGT GATCCCAATT
TGCTCTCCTC GGCAGAGTGA AGCAACTTAC AATCAGGCTT TTGAATCGAT TCATGAGGCG
TTAGCGAATG GTGAGTTAGT GTGTATCTTC CCCGAAGGCC GTTTAACGCC GGATGGCGAA
TTAGGCGAGT TCCGCCCCGG AATCGATAAA ATACTCGCTC GCGATCCGGT GCCCGTTGTC
CCAATGGCGC TTAATGGCTT GTGGGGCTCT TACTTCAGTC ATAAAGACGG CCATGCATTA
ACGACTATGC CAAAACGCTT TTGGTCTAAA GTGTCGGTGA ATTTAACGGA TGTGGTTGAT
GGGCAAGATG CCAATCGGTA CGCTTTAAGA GATGCCGTCG CCCATCTGCT CCACAAATAT
TAA
 
Protein sequence
MLLTKRFLPY FATQCLGALN DNIYKNVLLL LVTFSQVNNL PISVDMFVNL AAGVFILPFF 
LFSAHAGVVA DNMDKAKLIR RLKLLEVIIM FSAALAIVSE NYMMMLLLLF LTGSQSAYFG
PVKYSLLPQA LKEDELVTGN AWVEMGTFLS ILIGTLGAGI LVSDNNATLW SALTVAALAL
AGYLSSRAIP ALPPQGAVQK IPFRPLSGTW RSIQKARQTP SIWMAILAIS WFWFLGATYL
TQFPNFAKLH LHSGATVVSL LLGMFSIGIA VGSFVCERFS FGHVELGLLP FGVLGLTVFG
VDLLWAIPPA PADASFVYGL QTFIAQSQHY RVMLDFFMIG VSGGLFIVPL YAFIQTRSAK
GECAQAIAAN NIMNSLFMVA SALLSMLLLG VAGWSIPQLF LLLAVMNFVV ALYVYSQVPE
FTQRFISYLL SHVLYRVTVT GRDKIPKEGA GIIVSNHVSY VDALIIMGAS TRPIRFVMDK
SISEIPVLKY LFRHAGVIPI CSPRQSEATY NQAFESIHEA LANGELVCIF PEGRLTPDGE
LGEFRPGIDK ILARDPVPVV PMALNGLWGS YFSHKDGHAL TTMPKRFWSK VSVNLTDVVD
GQDANRYALR DAVAHLLHKY