Gene SO_0169 details

Gene Information

• Locus tag: SO_0169
• Symbol: gspG
• ID: 1168056
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 177279
• End bp: 177713
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637342172
• Product: general secretion pathway protein G
• Protein accession: NP_715811
• Protein GI: 24371769
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATGA ACAAAAAGCA CAAAGGTTTT ACCTTACTCG AAGTGATGGT GGTGATTGTT 
ATCCTCGGTA TTTTGGCGTC TATGGTGGTG CCAAACCTGA TGGGCAACAA AGATAAAGCT 
GACCAACAAA AGGCGGTATC TGACATAGTC GCGCTCGAAA ATGCCTTAGA TATGTACAAG 
TTAGATAACG GTGTGTATCC AACGACTGAA CAAGGTTTAG AGGCCTTAGT GCAAAAACCT 
ACTATTTCAC CCGAGCCACG TAATTACCGT GAAGAAGGTT ATGTGAAGCG TTTACCGCAG 
GATCCATGGC GTAATAACTA CTTACTGTTA AGCCCTGGCG AAAACAGCAA GTTAGATATC 
TTCAGCGCAG GCCCTGATAG TCAGCCAGGT ACCGAAGACG ATATCGGTAA CTGGAACTTA 
CAGAATTTCC AATAA 

 

Protein sequence

MQMNKKHKGF TLLEVMVVIV ILGILASMVV PNLMGNKDKA DQQKAVSDIV ALENALDMYK 
LDNGVYPTTE QGLEALVQKP TISPEPRNYR EEGYVKRLPQ DPWRNNYLLL SPGENSKLDI 
FSAGPDSQPG TEDDIGNWNL QNFQ