| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0102 |
|---|
| Symbol | fdnH |
|---|
| ID | 1167999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 111720 |
|---|
| End bp | 112634 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637342114 |
|---|
| Product | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit |
|---|
| Protein accession | NP_715744 |
|---|
| Protein GI | 24371702 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTC AAGATATCAT TCAACGTTCC GGCACTTCGC AAGCCACTCC GCCTGCACAG
GCAAGAGTGG GTGGCGTGAA GCAAATTGCG AAGTTGTTTG ACGCGACTAA GTGTAATGGC
TGTAAAGCCT GTCAGGTAGC TTGCTCAGAA TGGAATGACC TGCGTGAAGA GGTGGGTTCG
TTCCAAGGGA CTTATCAAAA CCCTGCATCT CTGTCTCCAG AGTGCTGGAC CTTGATGAAG
TACAACGAGA TCGAAGACCA AGGCAAATTG CGCTGGCAGT TTACTCACTC TGCCTGTATG
CACTGCGCCG ATCCCGCTTG CTTAAAGGCT TGCTCGACCT CTGGCGCAAT CATTCAGCAT
GCCAATGGCA CTGTGGATTT CGATTCGGAC AAATGTATTG GCTGTGGTTA TTGTGCCAGT
GCCTGCCCAT TCGATATCCC GAAGATCAGC GCCGTCGACA ACAAGGCCTA CAAGTGCACT
ATGTGTTCTG ACCGCTTGGC TGTTGGGCTG GAACCTTCCT GCGTTAAGTC CTGTACCACG
GGTGCGCTGC GTTTTGGTAC GCGCGAAGAC ATGCTGTTCG CCTCCGAAAA GCGTGTTAAC
GAGCTGAAAG AACGTGGTTT CCCTAAGGCG GGACTCTATA ACCCAGAGGG CGTGGGTGGT
ACTGGCATGC TGATGATATT GCATGATGTC ACTCAGCCTG AAACCTACGA AATGCCTAAG
GATCCGCAAA TCCCATTGTC TGTCACCCTG TGGCAGGACT GGGTGAAACC ACTGGGTACT
GTCGGACTTC TTGCGACGGC TGCTGTGGCT TGCCTGCATA AGATCACCGT CGGTCGCAAC
ATAGTGGAAG AGGACCAACC CGGCTATCAA CCGCCAGAGG AAGAGGTTAA GCAAGAAGAG
GAGGCCAAGA AATGA
|
|---|
| Protein sequence | MATQDIIQRS GTSQATPPAQ ARVGGVKQIA KLFDATKCNG CKACQVACSE WNDLREEVGS
FQGTYQNPAS LSPECWTLMK YNEIEDQGKL RWQFTHSACM HCADPACLKA CSTSGAIIQH
ANGTVDFDSD KCIGCGYCAS ACPFDIPKIS AVDNKAYKCT MCSDRLAVGL EPSCVKSCTT
GALRFGTRED MLFASEKRVN ELKERGFPKA GLYNPEGVGG TGMLMILHDV TQPETYEMPK
DPQIPLSVTL WQDWVKPLGT VGLLATAAVA CLHKITVGRN IVEEDQPGYQ PPEEEVKQEE
EAKK
|
|---|
| |