| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0092 |
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| Symbol | deoD-1 |
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| ID | 1167990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 100249 |
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| End bp | 100959 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637342105 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | NP_715734 |
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| Protein GI | 24371692 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGACTC CACATATCAA TGCGAATCCT GGTGACTTTG CAAAAACAAT TATTATGTCT
GGTGACCCAC TCAGAGCAAA ACTCATTGCA GAAACTTATT TAGAGGATGT AAAGGAAGTC
ACTAATGTTC GTGGAATATT AGGTTTTACT GGGAAATATA AATCTAAAGA TATTTCGATT
ATGGGTCATG GTATGGGCGC ACCTTCAGCC TCGATTTATT TTCATGAACT GATGGCAACC
TACGGCGTTA AAAACTTTAT TCGAGTAGGT AGTTGTGGGG CTATATCAGA TAATATTCAC
CTGAAAGATT TAATTGTTGC CATGGGAGCC TCTACAGACT CAAAAATAAA TCGTATTCGC
TTTTTAGACC ACGATCTTGC AGCCATTGCA AACTATGATC TGTTACAGGC GTGTATTGAA
GTGTTAAAAA CGACAACTGT TAACTATAAA GTAGGTAACG TGTTTTCATC TGATCTATTT
TATCGACCAA ATGAAAATGA CTATACCCTG ATGGCAAAAT ATGGCGTACT AGGTGTCGAA
ATGGAAGTAA ACGCTCTTTA TGCGCTTGCT GCTGAACATC AATGCCGCGC ACTTGCTCTT
TGTACCGTTA CAGACCATAT TGTCCAGCAT GAACATTTAA CGGCAGACGA ACGCAGAACC
GATCTCCATG AAATGGTCAA AGTCGCATTA GAAACAGCCA TTAAGATTTA A
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| Protein sequence | MSTPHINANP GDFAKTIIMS GDPLRAKLIA ETYLEDVKEV TNVRGILGFT GKYKSKDISI
MGHGMGAPSA SIYFHELMAT YGVKNFIRVG SCGAISDNIH LKDLIVAMGA STDSKINRIR
FLDHDLAAIA NYDLLQACIE VLKTTTVNYK VGNVFSSDLF YRPNENDYTL MAKYGVLGVE
MEVNALYALA AEHQCRALAL CTVTDHIVQH EHLTADERRT DLHEMVKVAL ETAIKI
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