Gene SO_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0087 
Symbol 
ID1167985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp97161 
End bp97721 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content49% 
IMG OID637342100 
Producthypothetical protein 
Protein accessionNP_715729 
Protein GI24371687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCA CGGGATTGAT TGACCCACTG GCGGTGATTA AACAGCCCGA AACCGCTCCC 
GCAGCCTTAG CCGAACAAAT TGCGGATCGT AAAAATGCTT GGATATTTCT CATCTATATC 
AGCTTATTAA CCCTAGTGAC CGTGAGGCAT GGCGTATTAG TCTTGCGTTA TAAGGCGCTG 
CGTCAGCAAT TAAAATCGCC GCTGCATATG TTGTTAATGC TGAGCTTAAC GCTACTTGGC 
CCTGTGATGG CGCTATGGGG ATATCAAGAA CAGCTGATCC TCGCGATAAT TTTTGGCCTG 
TTAGGTACTG CGGTTGGTGC GGGATTCTTG CGTTATAGCG TTAAGGCAAC GCTAACCAAA 
TTAGAATGGT GGATTGAGCA TTTAGGCGCC ATGATTGGCT CTGGCATCGC CTGTTACACT 
GCCTTTTTCG CCTTTGGCGG CGGCCGCTTG TTTATCGATC ATGGCAATTT GCGCTTACTG 
TCCTGGATTC TGCCAGGCGT AATAGGCTTT GTGGTCATCC GTTACTTAAG CCGTCAATAT 
CAGCGCCGAT TAGCGAATTA A
 
Protein sequence
MATTGLIDPL AVIKQPETAP AALAEQIADR KNAWIFLIYI SLLTLVTVRH GVLVLRYKAL 
RQQLKSPLHM LLMLSLTLLG PVMALWGYQE QLILAIIFGL LGTAVGAGFL RYSVKATLTK 
LEWWIEHLGA MIGSGIACYT AFFAFGGGRL FIDHGNLRLL SWILPGVIGF VVIRYLSRQY 
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