Gene SO_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0080 
Symbol 
ID1167978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp93185 
End bp93613 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content46% 
IMG OID637342093 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionNP_715722 
Protein GI24371680 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT TTCTCGCACA GCACCCTATC GTTACCCAAA TCCCCGTTGC TTGGGGCGAA 
ATGGATGCCT TGCAGCATGT CAATAATGTC GTCTATTTCC GCTATTTTGA AACCGCACGT
ATCGACTTTT TCAATCGCCT CTTCCCGCTC GATGCCCTGT ATAAATCCGG TGTTGGCCCT
GTGATTAGTG AGAATCAGGC GCGCTATAAA CGTCCAGTAA CCTTCCCCGA TACCCTATTG
GTCAGCGTAA GTATCAGTGA TATTCAAAGC GACAGATTTA CCATGCATTA TCAGGCCTTT
AGTAAACAAC AGCAGGCGGT AACAACCCTA GGCACTTCGG TCGCTGTGAT GTTTAACTTT
AAAACGGGTC AAAAAGCCGA ACTTCCCACA GAATTGCTCA CCATTCTAAA ACAACACGAG
CAAGCTTAA
 
Protein sequence
MEKFLAQHPI VTQIPVAWGE MDALQHVNNV VYFRYFETAR IDFFNRLFPL DALYKSGVGP 
VISENQARYK RPVTFPDTLL VSVSISDIQS DRFTMHYQAF SKQQQAVTTL GTSVAVMFNF
KTGQKAELPT ELLTILKQHE QA