Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0080 |
Symbol | |
ID | 1167978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 93185 |
End bp | 93613 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342093 |
Product | 4-hydroxybenzoyl-CoA thioesterase |
Protein accession | NP_715722 |
Protein GI | 24371680 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT TTCTCGCACA GCACCCTATC GTTACCCAAA TCCCCGTTGC TTGGGGCGAA ATGGATGCCT TGCAGCATGT CAATAATGTC GTCTATTTCC GCTATTTTGA AACCGCACGT ATCGACTTTT TCAATCGCCT CTTCCCGCTC GATGCCCTGT ATAAATCCGG TGTTGGCCCT GTGATTAGTG AGAATCAGGC GCGCTATAAA CGTCCAGTAA CCTTCCCCGA TACCCTATTG GTCAGCGTAA GTATCAGTGA TATTCAAAGC GACAGATTTA CCATGCATTA TCAGGCCTTT AGTAAACAAC AGCAGGCGGT AACAACCCTA GGCACTTCGG TCGCTGTGAT GTTTAACTTT AAAACGGGTC AAAAAGCCGA ACTTCCCACA GAATTGCTCA CCATTCTAAA ACAACACGAG CAAGCTTAA
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Protein sequence | MEKFLAQHPI VTQIPVAWGE MDALQHVNNV VYFRYFETAR IDFFNRLFPL DALYKSGVGP VISENQARYK RPVTFPDTLL VSVSISDIQS DRFTMHYQAF SKQQQAVTTL GTSVAVMFNF KTGQKAELPT ELLTILKQHE QA
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