Gene SO_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0073 
Symbol 
ID1167971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp84765 
End bp85628 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content51% 
IMG OID637342086 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_715715 
Protein GI24371673 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAG AGTTTCCCCC AATACTTGAG TTTTCTAAGG TAAACAAAGT TTTTCGTGGA 
AAAAATGGCG TTGAAAAACA GGCGTTAAAG GATCTGTCCT TGCGCTTGTC AGCCGGGATG
GTGGTTGGCT TATTGGGGCA AAATGGCGCA GGAAAATCGA CCTTAATGCG TTGTGCTTTA
GGGATTCTAT CGCCCGATTC GGGTGACATC CGCACCTTAG GTGAGACGCC GGAGCAACTC
TCATCAGCCG CAAAGGAGCG CCTTGGCTAT GTGCCACAGC AACCTTTTGG TTATGAAGGT
TTTACCGTCG AGCGCGCCCT CGATTTACAC CGCAGCTTTT ATCCCCACTG GGACATGCAG
TTAGAGCAAG ATTGGCTCGC TCGCTTTGAG TTAGATGTGA CTCAACAGGT GCAGCGTTTA
TCGGTTGGGC AAAGGCAATC GCTAGCGTTA ATTATGGCAA TGGCCTATCG CCCTGAGCTG
CTAATCCTCG ATGAACCCGT GGCGAGCCTT GATCCTATCG TTAGGCGCAA ATTTATGGTC
GATTTATTCG ACTTAGCCCT CGAATCCGGC TCGGCGGTGT TGTTTTCATC CCATATCACC
TCGGATTTAG AGCGGGTCGC GAGTCATGTG GCACTGATTA AACAGGGCGA ATTAGTGTTG
TTTAAGGAAA TCGATGCTCT GCGGGAAGAG GTGCGTCTAC TCAAACTGGC GGCGGGCGCT
GAGTTGCCTG AGCAGGTGCG CATTTTGAGC CGAGATGGTG ATTCTGTGCT GGTGGATAAG
GGCGAAGTCG ATCTCAATCT CCCTGGCGTG CAGCGAAGCG AGGCGCTTAA TTTGGAGCAA
CTCTTTGTGG AGTTACACAA ATGA
 
Protein sequence
MDQEFPPILE FSKVNKVFRG KNGVEKQALK DLSLRLSAGM VVGLLGQNGA GKSTLMRCAL 
GILSPDSGDI RTLGETPEQL SSAAKERLGY VPQQPFGYEG FTVERALDLH RSFYPHWDMQ
LEQDWLARFE LDVTQQVQRL SVGQRQSLAL IMAMAYRPEL LILDEPVASL DPIVRRKFMV
DLFDLALESG SAVLFSSHIT SDLERVASHV ALIKQGELVL FKEIDALREE VRLLKLAAGA
ELPEQVRILS RDGDSVLVDK GEVDLNLPGV QRSEALNLEQ LFVELHK