Gene SO_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0072 
Symbol 
ID1167970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp84353 
End bp84724 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content54% 
IMG OID637342085 
ProductGntR family transcriptional regulator 
Protein accessionNP_715714 
Protein GI24371672 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAC TTTTAAATGT CAACCCCAGC AGTGGGGAGC CAATTTACAA GCAATTACAC 
GAGCAAATCG TGCGCTTGAT TGTGGGCGGC CAACTGCAAG CGGAAGACGT ATTACCTTCA
GTACGCCAGA TTGCGGAATA CCTTGCAGTA AACCCGATGA CGGTATCCCG TGCGATTCAG
CAATTGGTGG ATCAGGGCTG GTTAGAGCGC CGCCGTGGAC AGGCGACTCG GGTTGCTGCC
CGTACCGAGG CGATGGAATC GGGCGTGAGT CTGCTTGAGC CACAATTAGA TGGCTTGTTG
GCACAAGCCA AGCAGCTGGG CGTGAGCCTG CCTGAGTTGC TGCAATTGAT TAACGAGCGC
TGGCAAGCCT AG
 
Protein sequence
MLELLNVNPS SGEPIYKQLH EQIVRLIVGG QLQAEDVLPS VRQIAEYLAV NPMTVSRAIQ 
QLVDQGWLER RRGQATRVAA RTEAMESGVS LLEPQLDGLL AQAKQLGVSL PELLQLINER
WQA