| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0071 |
|---|
| Symbol | |
|---|
| ID | 1167969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 82641 |
|---|
| End bp | 84260 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637342084 |
|---|
| Product | alpha/beta fold family hydrolase |
|---|
| Protein accession | NP_715713 |
|---|
| Protein GI | 24371671 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGATA GCATGACCCA CAGGAAGTCC CATAATGCCA GCGCTTGCGT TGCGATTAAG
CGCTCAAACA CAGGCTGGCA TAAACGTATT TCAACCAGCA AAATCATAGG CTTGAGCACA
CTTATGCTCG CCATGTGTAG CGCAACGGTT TGGGCAAGTG ATAAACCAAC TCCTCCAACA
ACCCCCACGA ATACCTGTTA TGTAGAAGGC GTCTCCGACC GCTTACAATG CGGCTTTGTG
ACCGTACCCG AAAACCCCAA TCAGCCTGAT GGCAAGCAGA TCCAAGTGCA TTATGTTGTC
CTGCCAGCGG TAAAAAATGC CAACCATGAA GAAGCACTAT TAGCCATCGC TGGCGGCCCA
GGGCAATCGG CCATCGATAA CGCGGCAAGC TTTAATACCG TGCTCAACAA GGTGCGCCAG
CAGCGAGATA TTTTGCTGAT TGATCAACGT GGTACTGGCC GCTCAAACCT ATTGAATTGC
GATGCAGGCC CACAATCCTT ACTCGCCTTC AACGATGACA ATGTCGATAG CTTAGCCGAG
GCGCAAAAAT GCCGAGATCA ATTGGCGGGT AGCGATGTAA CCCAGTACGG CAGCCTTAAC
GCCGTCAAAG ACTTCGAAGC CGTGCGCGCC CATTTAGGCT ACAAAAAGCT GCATTTATAC
GGCATTTCCT ACGGCACACG CATGGCGCAG CTCTATATGC GCTTGTATCC CGAGCATTTA
GCCACTGTCA CCTTAGACGG CATAGTGCCG ATGCAGCAAA GCGTATTAGA AATCGGCTCG
GCGATTGAGC GCGGCTTTGA CTTACTGTTT AAAGACTGCC AAGAAACCGC GGCCTGCCAT
GCCAAGTTTC CAGAGCTCAA GGCCGAGTTT GACCAAGTGG TTGCAAGACT GACCGAAGGG
CCAATCATGG AGCAAGTGCA CGACCCCGTC ACAGGTGAAA AGACCTTACT CACCATGACC
CGTGCGAAGT TTTACGGCGC GATCAGAATG GCGCTGTATC AAACCAATGT GCGCGCCTTA
GTGCCCCATG CAATTCATCA AGCCGCCAAA GGTAACTATC AACCGCTACT CGGATTGTAT
GCCTTAACTA CCGATGGTGC AGGCATGGCA ATGGGCATGC ACGCCTCCGT GGTCTGTGGA
GAAGACATCC ATCGAATCAC TCCTGCGATG CGTGAGCAAG CCAAAACCTC CTATGTCGGT
AAAACCATGC TCGAAAGCCT GGAAGCATCA TGCTCTGTGT GGAAAGTGCC GCCCGTCGAT
GCCAGCTTTA GTGAACCGAT CAAGAGCGAC ATCCCAACAC TGTTGCTCTC GGGTGAAATC
GACCCAGCAA CACCACCGAG TTGGGGTGAG CTTGCCATGG AAAAACTCAC CAACGCTAAA
CACTTTATCG CGCCCTACGC CACCCATGGC GTGGCCTATC AGTCCTGCGC AAATAACTTA
GTTGCCGAGT TAGTGCGTAC AGGCTCAGTT AAAGATCTCG ATGGTGAATG TTTGAAAAAG
GATGTGCGCC GTAGCTTTTA TTTAAACGCC AGCTCGGTTG AGCCACTTAC CACCGAAGCC
GCAACCAACT CAGCCAAAGA TAAGCCCAAG GATAAGCCCA GCACTGGAGC CAAGGAGTAA
|
|---|
| Protein sequence | MRDSMTHRKS HNASACVAIK RSNTGWHKRI STSKIIGLST LMLAMCSATV WASDKPTPPT
TPTNTCYVEG VSDRLQCGFV TVPENPNQPD GKQIQVHYVV LPAVKNANHE EALLAIAGGP
GQSAIDNAAS FNTVLNKVRQ QRDILLIDQR GTGRSNLLNC DAGPQSLLAF NDDNVDSLAE
AQKCRDQLAG SDVTQYGSLN AVKDFEAVRA HLGYKKLHLY GISYGTRMAQ LYMRLYPEHL
ATVTLDGIVP MQQSVLEIGS AIERGFDLLF KDCQETAACH AKFPELKAEF DQVVARLTEG
PIMEQVHDPV TGEKTLLTMT RAKFYGAIRM ALYQTNVRAL VPHAIHQAAK GNYQPLLGLY
ALTTDGAGMA MGMHASVVCG EDIHRITPAM REQAKTSYVG KTMLESLEAS CSVWKVPPVD
ASFSEPIKSD IPTLLLSGEI DPATPPSWGE LAMEKLTNAK HFIAPYATHG VAYQSCANNL
VAELVRTGSV KDLDGECLKK DVRRSFYLNA SSVEPLTTEA ATNSAKDKPK DKPSTGAKE
|
|---|
| |