| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0066 |
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| Symbol | |
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| ID | 1167964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 72364 |
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| End bp | 78060 |
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| Gene Length | 5697 bp |
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| Protein Length | 1898 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342079 |
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| Product | hypothetical protein |
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| Protein accession | NP_715708 |
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| Protein GI | 24371666 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCTC TGTTAGCAAA TATCTTTGGT CATTGGCAAT CACCACCTTG GATGCATTGG
TGTAAAGCCC ATCCAGGTAA AAGTATAGGT AGCTTATTAG CCCTATTACT CGTCTCTGCT
GGCCTATGGA CAGCATGGGA TTGGTATCAG CATTTACCTC AGCCACAGAC AGTGCAGTCG
AGCATATTCG CACCATCATT GACTAACTAT GAGGCTGATA AGCCTGAGGT TGCACCGCTA
GTTATTCGTT TTAGCGATTC AGTTGCCCCC CTCGATAATA TTGGTAAACC CTTGAATAAG
GGTATCAAAT TGAGCCCTGA GATTGCAGGG CAATGGCGTT GGTCTAGTGA TAAACATTTA
GAGTTTCAAC CTGACGCTGA CTGGCCGGTG GATAAAACCT ACAGTCTCAC TTTGGATGGT
GATGCATTAT TAGCCAGCCA TATCCTGCTG GATAACTATA TTTTTGAGTT TAAGACAGCT
CCTTTCAGCG CCAAAATTAG CGATGCGCGC CTTTACTACG AACCGAATCA GCCAAATATT
CAAAAGGTTG TCGCAACCGT TCATTTTAGT CATCCCGTCG CAACTCAGAC GGTAAAGTCG
GCGTTATCTG TAGTGTTAAG CCCTGGTTTA ACCTATAGCC AAGGCAGCGA TTATCAACTG
ACCTTCGATG ATAAACACTT AAATGCTTAT ATTCATACTG CGCCGTTAGC GACACCATTA
GAGCCGAGTA CGGTTAAATT AGAACTGAGT AATAAAATTA AAGCGGCTTT CGGTGGTAAT
GCGGCCGAAG AAGACAGTAC TGAGGTGAGT GTTCCTGGGC GTTATCAGTT AAGTTTTTCC
GCTGCTCAAA TTAGTTTCGC CAAAAACGAT CAAGAAGAGC CCGAGCCTGT ATTAACCATG
GAGAGTTCTC GTCCAGTGGC GGATGCGGCA CTTAAGGGTA AGGTCGAGGC TTGGCTGCTG
CCGCCAAAAG ATCCACAAGG AAATACCTAT TGGGGTACTC AAAACATCAC TGATACTGTG
TTGCGCAAAG CATCAAAAGT GACTTTGATC CAAAACCCAG GACCTGAAGG GCTTAATCAG
TTACATAGTT TTAAATTTCA AGCACCTGTT GGTCGTTATC TTGCTGTTAG GGTCGCTAAG
CATGTGGAAG GCCAAGGGGG CTATTTGTCC CGTGATGCTG CTTTTTCTGT GGTGCGAATG
CCTGAATATC CAAAGGCGCT TGCGTTCCTC GGCGAGGGGG CTCTGCTGAC GTTAAATGAT
GATCAGCGTT TAGGCTATCT CGTGAGAGGT GTTGCAGATG TCAGGATTGA GGTTGCTCAA
CTGTTGCCCG ACCAAATTCA TCAACTGGTC GATGAGGATT CGGGTATTTT CAAGGTTCAG
TATTTTAACA ATAACCTCTT CGATCGATTG GTCACACGTA CCGAAATAAT CCAAAAATTT
GTCACGGATG ACCCCGCTAA AACCTCCTAT GGTGAGGTCG ATCTTAAATC CTACTTTGCT
GATAAGCGCG GCATTTTTGT GCTTAAGTTG ACATCCGCCG AAGATCATAA TGACGATACC
TTCGATTATT ATCCACGTGA AGCACATGAT TTACGTTTTG TCGTCGTAAC CGATATGGGG
ATTTTGGCTA AGCGCAGTGT CGACGGCAGC TTGGATATAT TTGTGCAGTC TTTATCCCAG
GGGCTACCGA TTGCCAATGC TAAGGTGGAC GTAGTTGGGC GCAACGGTCT GTCGGTGGCG
GAAGGATTTA CTGATCTAGG CGGCCATGTC CATTTGCCTA AATTAGGCCA ATTGCGCCGT
GAAAAAAGAC CGCTCTTCTA TCGAGTAGAA AAAGCCGGCG ATGTTTCATT CTTGCCGATA
GGCGACTGGC GCCGCGAGCT TGATATGTCG CGTTTTGATA TTGGCGGTAG CAACGAGAGT
GAAGATCCAA ATACGCTGAG TGCCTACTTG TTTACTGACC GAGGATTATA TCGCCCTGGT
GAAACCGCCC ACGTGGCTAG TTTAGTCAGG AGCCAGAGTT GGGGCGCTTC TTTAGATGGC
TTGCCTGTCA AAATGGTGGT GACCGATCCG CGTGGCATTG ATGTATTAGA TCGTACCTTT
AATTTAGATT CGAGTGGTTT TAATAGCTTG GATTTTAGTA GTACAGAAGC CGCCGTTGCG
GGTGAGTACA CTGCGAGCCT GTCATTAATT CGCGATAAAC ATAATTTGAC TCGTTTGGGC
GAGGAGAGCT TTAAAGTTCG CGATTTTGAA CCCGACCGGA TCAAGGTCAG AGTCACGCTT
GGCGCAACCG AAAGCGGCAC CAGCATCGGT TGGTTAAAAC CCGAAGAGGT GTCGGCAAAA
GTTCAGGCTG AGCAACTGTT TGGTGGACCT GCAGGTGATC GACGCGTGAC TGGCGAAATG
GTGTTGTCGC CCACGGATAT TAGTTTTAAA GAATTGCCTG GTTATTACTT TGGCGTACAG
GGGGAGCTGA AGGAATCCTT CCGTGAGACC CTCGCGGAAG CGAAAACCAA TGAGGAAGGT
GTTGCTGGGC TTAATCTAGC CTTAGATCGG TTTGGACAAA CGACATTCAA GTTACATTTG
CTCGCAAAAG TGTATGAGGC TGGCTCAGGT AGAAATGTGA GCGCTCAAGA TAAGGCATTG
GTCTCGAACG CCGATTTCCT GCTGGGTTAT AAAGCCGATG GGGATTTGGG TTTTATAAGT
AAAGATGGGG AGCGGCATCT TAAGTTAGTG GCTGTGGGGC AAGATTTAAA ACCTCGAGTC
ACACAACTTC AGGCGGAGCG TATTGCTCGG CGTTGGGTCT CCGTGTTGGT GAAACAACGT
GATGGCACCT ATCGTTACGA GTCTCGTCGT AAAGATGAGC TATTAGAAAG CAATACCTTG
CAACTTAATA AGGGGCAACT CGATATTGCG CTCGATACAA GTGAACCCGG TGATTACCAA
CTCAGGTTCA TTGATGCCGA GGGGCATCAG CTTAACCAAA TTGACTATAG TGTTGCAGGT
CAAGGAAATG CGAGCCGTGC CTTGGAGCGT AATGCTGAAC TCCAGCTCAA GTTAGACAAA
GATGAGTATC AGCCCGGTGA GATGATCAAT ATCGCGATTC AAGCACCCTA TACTGGTGCT
GGTCTTATTA CCATTGAGCG AGATAAAGTT TATGCATTTG AATGGTTTAA TGCAGACAGT
AGTCGCTCTG TGCAGTCAAT TCAATTACCC GAGGGCATAG AAGGCAACGC CTATGTGAAC
GTGCAGTTCT TGCGTGCGCC GGATTCTGAT GAGATTTTTA TGAGTCCGTT ATCCTATGGG
GTGAAACCCA TTAAGATCGA TCTCGGCGCG CGTCGTCAGC CCTTGTCGTT AAGTCTGCCG
GAGCAGATGA AGCCGGGTAA TGATCTCAAA ATAGCCTTGA ACTTGCCTAC GGACTCAAAA
GTCGTGGTCT TTGGGGTGGA TGAAGGCATA TTACAGGTCG CCCGCTATAA GGCTCCCGAT
CCATTAGGAC ACTTTTTTGC GAAAAAGGCA TTGACGGTAA ACTCGAGCCA AATTTTAGAC
TTGTTATTAC CGGATCTTAA CGTGTTAATG CGTAATGCCG CACCGGGTGG CGACGCAGAA
GCGTTGCTTG CTGCCAATTT AAATCCCTTT AAGCGTAAGC GCGCATCACC CGTCGTTTAT
TGGTCTGGAT TACAGGATCT CAGTGCCGGT GAACAGCAGT TTAATTACAG TGTGCCCGAT
ACCTTTAATG GAAAAATCCA CTTTTTTGCG GTCAGTGTGA CAGACAGCAA TATGGGGGTG
GCGGAAGCTT CGGTAAACGT GAAGGCGCCT GTTGTGATGA CTCCGAACGT GCCCGCGTTT
ATGGCTCCGG GTGATGAGGC TGAAATCACA TTGGGTCTCT ATAACACTGA GTCTACGTCT
ACCCATGTCC AAGTGGCGTT GTCTTTGGAG GGGGGATTAG CACCGTTAGC GGGGGCTGAG
CAATCATTCG ACATTCTGCC AGGGCAAGAG GTAACGGCAC GTTTTACACT CAAGGCAATT
GAGCCTTTAG GGGAGGCGAA GTTACATTGG ATGCTCAAGG GGGAACAAGG AGACTTCAAG
ATTGGAGAGA GCATTTCTAT CCGGCCCCTG ACAACGCATC GTGTACAACT ACAGACGGCA
GTATTGGATA GTGCAGAGAA GCAATTATCG CTGGAACGGC AGTTATTTGA GCCGTTTAGT
CGCAAAGAGG CCGGACTTCA AAGCAGTCCC TTGGTCTGGG CGCAGGGCTT AAGTGCTTAT
CTTGAGAGTT ATCCCCATGC TTGCACCGAA CAGCTGGTGT CTAAATCGGT TCCTGCACTG
GTATTGGGAA AACCGCAGGA TAATTTATCA GCCTTTAATC AACTGATGAC TCAACTCCGT
AGCCGCCAGA ACAGTGAAGG TGCCTTCGGT GGCTGGGCGG CTAATCCCGT TGTAGAACCT
ATGGTCACCC TGTACGTCGT GGATATGTTA TTGGATGCCC AAGGTAACGG TTATGCTGTA
CCGCAGGATA TGTTAGACAG AGCCAATGGC TATTTATCTG AACTGAGCAG CAGCCCAAGT
AGTGGTTTAA GCGAGTTACG TCAGCGTGCC TATGGCGCTT ATCTCTTGGC CCGCCAAGGA
GTGCAGGTCA GTGGTGCTCT GGCCGATATT CGCGATCGAT TACAGCGTTA TTATCCTAAA
GACTGGCAGT CGGATATTGC GAGCGCTTGG CTAGCAGCGA GTTTTACACT TATGCAGCAA
CAGACGTTGG CTAAGCCGCT TTGGGACGCG CAAGTATGGG AATTAATGCA GAAAACGCCA
AAGCATCTTG ATCTGTATTT AGATCCTTTA GTTCATGATG CTCAGTTATT GACCCTAGTC
GCCCGTCACG CCCCAGAACG CCTTGCTAAG CTACCTGAGG GATTGTTAGA ACGTGTGGGT
AACTGGTTAT CGGCACAACG CTATACCTCT CTATCTGCAG GCACGTTAGT GCGGGCGCTG
GCTGCCTACG ATCAGCAAGC GACCAGTGGT GAGTTGACGT TAACAGCACA AGTGGCGGAC
AAGTGGATCA TTCAGAGTCT GCCTAAGGCT GAGTTACCGT TTACTACCAA TAAGATCAAA
GTCCAAAAGA CGGGTGATGC TGATGCTTTC TACATGTCGA TGGAATCCGG TTTCGATAAG
CAGCCCGTTG CCGCATTCAG TCACGGTTTA GAGGTGAGTC GCGATTACTT AGACCTGAAG
GGACAGCCGC TTAAGGGATT GAAAGTCGGT GAGGAGTTCT TGGTTCGGTT AAGGCTGCGT
GCGACATCCT TTGAACAACT GGAACAGGTC GTCGTTATCG ATTTGCTTCC AGGCGGCGTT
GAGCCTGTAT ACCGAGATAA AGAGGTGGTT ATGGTTGTTA CCGTTGTTCA AGAAGGTGAA
GAAGGCGAAG AAAGTGATGA AGAAGGTGAC GGCGAAGAAG GCGAAGCTTT CAATGGCTGG
CAGCCGCCGA TAGGTGTTGG TGAACAGAGT GATTGGTCCC CTACATGGCT CAATGTCCGT
GAGGATCGAG TCGTATTGTA TGGTACGGCT AGCCGTGATG TGGGAACGTT TACTTATAAA
GCACGCGCCA CCAATGCTGG TCATTTCCAA GTGCCTGCAC CCTATGCAGA AGGGCTGTAT
GATCCTCTGC AACAAGCACT AGGAAAAGGT AGTGAATTAG TCATCTCGGC GCCATGA
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| Protein sequence | MKALLANIFG HWQSPPWMHW CKAHPGKSIG SLLALLLVSA GLWTAWDWYQ HLPQPQTVQS
SIFAPSLTNY EADKPEVAPL VIRFSDSVAP LDNIGKPLNK GIKLSPEIAG QWRWSSDKHL
EFQPDADWPV DKTYSLTLDG DALLASHILL DNYIFEFKTA PFSAKISDAR LYYEPNQPNI
QKVVATVHFS HPVATQTVKS ALSVVLSPGL TYSQGSDYQL TFDDKHLNAY IHTAPLATPL
EPSTVKLELS NKIKAAFGGN AAEEDSTEVS VPGRYQLSFS AAQISFAKND QEEPEPVLTM
ESSRPVADAA LKGKVEAWLL PPKDPQGNTY WGTQNITDTV LRKASKVTLI QNPGPEGLNQ
LHSFKFQAPV GRYLAVRVAK HVEGQGGYLS RDAAFSVVRM PEYPKALAFL GEGALLTLND
DQRLGYLVRG VADVRIEVAQ LLPDQIHQLV DEDSGIFKVQ YFNNNLFDRL VTRTEIIQKF
VTDDPAKTSY GEVDLKSYFA DKRGIFVLKL TSAEDHNDDT FDYYPREAHD LRFVVVTDMG
ILAKRSVDGS LDIFVQSLSQ GLPIANAKVD VVGRNGLSVA EGFTDLGGHV HLPKLGQLRR
EKRPLFYRVE KAGDVSFLPI GDWRRELDMS RFDIGGSNES EDPNTLSAYL FTDRGLYRPG
ETAHVASLVR SQSWGASLDG LPVKMVVTDP RGIDVLDRTF NLDSSGFNSL DFSSTEAAVA
GEYTASLSLI RDKHNLTRLG EESFKVRDFE PDRIKVRVTL GATESGTSIG WLKPEEVSAK
VQAEQLFGGP AGDRRVTGEM VLSPTDISFK ELPGYYFGVQ GELKESFRET LAEAKTNEEG
VAGLNLALDR FGQTTFKLHL LAKVYEAGSG RNVSAQDKAL VSNADFLLGY KADGDLGFIS
KDGERHLKLV AVGQDLKPRV TQLQAERIAR RWVSVLVKQR DGTYRYESRR KDELLESNTL
QLNKGQLDIA LDTSEPGDYQ LRFIDAEGHQ LNQIDYSVAG QGNASRALER NAELQLKLDK
DEYQPGEMIN IAIQAPYTGA GLITIERDKV YAFEWFNADS SRSVQSIQLP EGIEGNAYVN
VQFLRAPDSD EIFMSPLSYG VKPIKIDLGA RRQPLSLSLP EQMKPGNDLK IALNLPTDSK
VVVFGVDEGI LQVARYKAPD PLGHFFAKKA LTVNSSQILD LLLPDLNVLM RNAAPGGDAE
ALLAANLNPF KRKRASPVVY WSGLQDLSAG EQQFNYSVPD TFNGKIHFFA VSVTDSNMGV
AEASVNVKAP VVMTPNVPAF MAPGDEAEIT LGLYNTESTS THVQVALSLE GGLAPLAGAE
QSFDILPGQE VTARFTLKAI EPLGEAKLHW MLKGEQGDFK IGESISIRPL TTHRVQLQTA
VLDSAEKQLS LERQLFEPFS RKEAGLQSSP LVWAQGLSAY LESYPHACTE QLVSKSVPAL
VLGKPQDNLS AFNQLMTQLR SRQNSEGAFG GWAANPVVEP MVTLYVVDML LDAQGNGYAV
PQDMLDRANG YLSELSSSPS SGLSELRQRA YGAYLLARQG VQVSGALADI RDRLQRYYPK
DWQSDIASAW LAASFTLMQQ QTLAKPLWDA QVWELMQKTP KHLDLYLDPL VHDAQLLTLV
ARHAPERLAK LPEGLLERVG NWLSAQRYTS LSAGTLVRAL AAYDQQATSG ELTLTAQVAD
KWIIQSLPKA ELPFTTNKIK VQKTGDADAF YMSMESGFDK QPVAAFSHGL EVSRDYLDLK
GQPLKGLKVG EEFLVRLRLR ATSFEQLEQV VVIDLLPGGV EPVYRDKEVV MVVTVVQEGE
EGEESDEEGD GEEGEAFNGW QPPIGVGEQS DWSPTWLNVR EDRVVLYGTA SRDVGTFTYK
ARATNAGHFQ VPAPYAEGLY DPLQQALGKG SELVISAP
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