Gene SO_0052 details

Gene Information

• Locus tag: SO_0052
• Symbol: secB
• ID: 1167951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 58105
• End bp: 58578
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637342066
• Product: preprotein translocase subunit SecB
• Protein accession: NP_715694
• Protein GI: 24371652
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1952] Preprotein translocase subunit SecB
• TIGRFAM ID: [TIGR00809] protein-export chaperone SecB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAG TAGCAAACAA CGAACAACAA GCCCCACAAT TCAACATCCA ACGTGTTTAC 
ACTAAAGATG TTTCTTTCGA AACACCTAAC AGCCCAGCGG TATTCCAAAA AGAATGGAAT 
CCAGAAGTTA AGTTAGATTT AGACACTCGC AGCGCTAAAT TAGCCGATGA CGTGTATGAA 
GTGGTTCTGT CTTTGACTGT GACTGCACAA AACGGCGGCG AAACTGCATT CCTGTGTGAA 
GTACAGCAAG CAGGTATCTT CTCAATTGCA GGTCTGACTG AGCCACAACT GGCTCACTCA 
TTAGGCGCAT ACTGCCCTAA CATCCTATTC CCATATGCGC GTGAAGCGGT TGGTAGCTTA 
GTGGGTCGTG GTACTTTCCC ACAATTGAAC TTAGCGCCAG TAAACTTCGA CGCTCTGTTT 
GCCCAATACG TGCAACAACG TCAAGCCGCA GCCGCTGAAG AAGCTAACGC TTAA 

 

Protein sequence

MAEVANNEQQ APQFNIQRVY TKDVSFETPN SPAVFQKEWN PEVKLDLDTR SAKLADDVYE 
VVLSLTVTAQ NGGETAFLCE VQQAGIFSIA GLTEPQLAHS LGAYCPNILF PYAREAVGSL 
VGRGTFPQLN LAPVNFDALF AQYVQQRQAA AAEEANA