Gene SO_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0045 
Symbol 
ID1167944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp52004 
End bp52459 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637342059 
ProductRrf2 family protein 
Protein accessionNP_715687 
Protein GI24371645 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAA CACGCTATAC CGATTTTGGT GTTCGCACGC TAATGTATCT GGCGGTTCAG 
CCCGATAGAA CTACGCTTTT TAGGATTTCA GAAATTACTG AAGTCTTTGA TTTGTCACCA 
AATCATGTTT CGAAAATAGT ACACCACCTA GGCAAGTTAG GTTACTTAGA AACCATACGC 
GGTAAAATGG GCGGATTTCG TTTAGGCAAA CCGGCGGGCG AGATTAATTT AGGGCAACTC 
ATTCGCTCCT TAGAAAATTC GCTGGCGCCG ATCGATTGCA GCAAACCTTA CTGTCGATTC 
ACTCCTGCTT GTCAGTTGAA AGGTGTATTA GCCCAAGCGG TTGAGGCATA TTTAAATGTG 
CTTGATCAGT ACAGCTTACT AGATATTGTA AGCAATCGTA ATGAGTTGCT GGCATTGTTG 
CCGGATATGT CTATTTCTGT CTTACAGTTA GATTAG
 
Protein sequence
MQLTRYTDFG VRTLMYLAVQ PDRTTLFRIS EITEVFDLSP NHVSKIVHHL GKLGYLETIR 
GKMGGFRLGK PAGEINLGQL IRSLENSLAP IDCSKPYCRF TPACQLKGVL AQAVEAYLNV 
LDQYSLLDIV SNRNELLALL PDMSISVLQL D