Gene SO_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0037 
Symbol 
ID1167935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp41557 
End bp42123 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID637342046 
ProductSua5/YciO/YrdC/YwlC family protein 
Protein accessionNP_715679 
Protein GI24371637 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAAC TGCACCCATC TGACATTAAA GACGTAGTGT TAAACGGTGG GGTTATCGCT 
TATCCCACCG AAGCCGTTTA TGGCTTAGGT TGTGACCCTG ATAATGATAC CGCCATTCAA 
AAGTTACTCG CCGTGAAACA ACGTCCTTGG CAGAAAGGAC TTATCTTAGT GGCGAGTGAG 
TTTTCGCAGT TATTAGCCTA TGTCGATGAA TCACAGCTGA CCGATGAGCA GCTCGAATTG 
GCTTTCTCCA AATGGCCTGG GCCTTTTACC TTTGTCATGC CGATTAAACC TCATGTCTCG 
CGTTATTTAT GTGGTGAGTT TGATTCGATA GCCGTACGTG TGTCCGCCCA TGAAGGGGTG 
CGAGCTTTAT GCCAAGCCTT AGGTAAACCA CTGGTCTCGA CCAGTGCCAA TTTAGCCGGC 
GAAGATCCCG CGCTCAGCGG CGATGAGATT CTCAATGTCT TTGAAGGCAA AATTGATGCC 
TTGGTGCTGG GTCAATTAGG TGAGCAACGT CAACCCTCCA CCATTATTGA TGCCCGCAGC 
GGCAAGATTT TACGCAATGG ACAGTAA
 
Protein sequence
MLQLHPSDIK DVVLNGGVIA YPTEAVYGLG CDPDNDTAIQ KLLAVKQRPW QKGLILVASE 
FSQLLAYVDE SQLTDEQLEL AFSKWPGPFT FVMPIKPHVS RYLCGEFDSI AVRVSAHEGV 
RALCQALGKP LVSTSANLAG EDPALSGDEI LNVFEGKIDA LVLGQLGEQR QPSTIIDARS 
GKILRNGQ