Gene SO_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0036 
Symbol 
ID1167934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp40852 
End bp41418 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content46% 
IMG OID637342045 
Producttopoisomerase DNA-binding C4 zinc finger domain-containing protein 
Protein accessionNP_715678 
Protein GI24371636 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCTA AGATCGATGA ACAACTATTT AGTGCCCATG AGCACGCACT GGAAAAAGAA 
TACGAGTTGT GCCCAGAGTG TGGTAGCGAG TTATCGGTAA AACACAGTAA GCACGGCAGT 
TTTATTGGTT GTAATAATTA TCCAAACTGC GCATATACCC GTCCTTTAGT GCAGCATGAA 
TCGATTGAAA CCCAAGTGAT TGAAGGTTCT AAATGCCCTG AGTGCGGTCA CGAGTTGGCG 
GTAAAATCGG GGCGTTTTGG TATCTTTATT GGCTGTACGC AATATCCCAG TTGTACCCAC 
ATCGAAAGGC CGGATCAGGA AAGTGACAAA CCTCAGGTGG CCTGTCCAGA ATGCAAAACG 
GGTAAGCTTG AGCATCGTAC TAGTCGTTTT GGCAAGGGTT TTTATGCCTG TAGTGCATAT 
CCAAAATGCA AATTCATTGT GAATTATCCT CCCGTTGGCG AAACCTGCCC AAGTTGCGGT 
TTTGGGATTT TAGTCGAGCG TAAAGGAGCC GCGGGGATGC GTTTAGAGTG TCCGCAAAAA 
AGCTGTAAAT ACAAACGAGC GCTTTAG
 
Protein sequence
MMSKIDEQLF SAHEHALEKE YELCPECGSE LSVKHSKHGS FIGCNNYPNC AYTRPLVQHE 
SIETQVIEGS KCPECGHELA VKSGRFGIFI GCTQYPSCTH IERPDQESDK PQVACPECKT 
GKLEHRTSRF GKGFYACSAY PKCKFIVNYP PVGETCPSCG FGILVERKGA AGMRLECPQK 
SCKYKRAL