Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0034 |
Symbol | |
ID | 1167932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 39244 |
End bp | 40260 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342043 |
Product | DNA processing protein DprA, putative |
Protein accession | NP_715676 |
Protein GI | 24371634 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTGG ACGACCTCAG GCAAAGACTC GAGCATGAGA AACACTCGCT CCCTTTGTCT GATAATCTGC TCCACAGCTT AGTTATTGAT TATCAAAAAG TAGACGCCGC TTTGGAATGG CAACAACAGG CGGCACACCA TCATCTAGTT TGTTTTTCTG ATCCCCTCTA TCCACCGCTA CTAAAACAAT TAACCGATCC CCCCTGTGTG TTGTTTGTTA AAGGCTGCGT TGAGGCGTTG GCGATACCGT CACTTGCCAT TGTTGGCAGC CGTAATGCGT CTCCCGGCGG ATTGCAGGTG GCTTATCAGC TGGCGAGAGA GATGACTGCC CTCGGATTTA GCATTTGCAG TGGCATGGCG ATGGGGATAG ACGGTGCAGC ACATAAAGCC TGTGTTGATC ATGCTGGAAG GACGCTTGCT GTATTGGGGA CGGGTATTGA TATCATTTAT CCGCGCCGAC ATAAGCAGCT TTATGAGGAT ATTCAGCGTC AAGGCTGTAT AATAAGCGAG TTTTGGCCGG ATGTGGGGCC TTTTGCGGGC AATTTCCCGA AACGAAATCG CATTATTAGC GGTCTTTCTT TAGGGACGTT AGTCGTTGAA GCTTGTCGCA AAAGTGGTTC GCTCATTACC GCAAGATTGG CCATGGAGCT GGGGCGTGAA GTTTTTGCTG TGCCGGGCTC CATTCTTGGT GGCTTTCATC AAGGTTGCCA TGATTTATTA CGTGACGGGG CAAAACTTGT GGAAAGTGCG GCCGATATAG TGGAAGAGCT GGCAAGTTTG ACTGCATTTC ATCTTGAAGA AGTCAACTCC TGCCACCATA TACAGCAGGG TGAGATTTGT GATTTGCCAT TTTCATCGCT GTTAGCTAGT GTTGGTTATG AAACGACAGC AATTGATGCT GTAGTCGAAC ATAGTGGGAA AACGATAGAT CTGGTGTTAG AACAAATGCT TGAACTTGAG TTGCAAGGTT GGGTTGTTGC AGTACCCGGT GGTTACGTCA GAGTAAAGAG GAGCTAG
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Protein sequence | MDVDDLRQRL EHEKHSLPLS DNLLHSLVID YQKVDAALEW QQQAAHHHLV CFSDPLYPPL LKQLTDPPCV LFVKGCVEAL AIPSLAIVGS RNASPGGLQV AYQLAREMTA LGFSICSGMA MGIDGAAHKA CVDHAGRTLA VLGTGIDIIY PRRHKQLYED IQRQGCIISE FWPDVGPFAG NFPKRNRIIS GLSLGTLVVE ACRKSGSLIT ARLAMELGRE VFAVPGSILG GFHQGCHDLL RDGAKLVESA ADIVEELASL TAFHLEEVNS CHHIQQGEIC DLPFSSLLAS VGYETTAIDA VVEHSGKTID LVLEQMLELE LQGWVVAVPG GYVRVKRS
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