Gene SO_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0034 
Symbol 
ID1167932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp39244 
End bp40260 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content48% 
IMG OID637342043 
ProductDNA processing protein DprA, putative 
Protein accessionNP_715676 
Protein GI24371634 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTGG ACGACCTCAG GCAAAGACTC GAGCATGAGA AACACTCGCT CCCTTTGTCT 
GATAATCTGC TCCACAGCTT AGTTATTGAT TATCAAAAAG TAGACGCCGC TTTGGAATGG
CAACAACAGG CGGCACACCA TCATCTAGTT TGTTTTTCTG ATCCCCTCTA TCCACCGCTA
CTAAAACAAT TAACCGATCC CCCCTGTGTG TTGTTTGTTA AAGGCTGCGT TGAGGCGTTG
GCGATACCGT CACTTGCCAT TGTTGGCAGC CGTAATGCGT CTCCCGGCGG ATTGCAGGTG
GCTTATCAGC TGGCGAGAGA GATGACTGCC CTCGGATTTA GCATTTGCAG TGGCATGGCG
ATGGGGATAG ACGGTGCAGC ACATAAAGCC TGTGTTGATC ATGCTGGAAG GACGCTTGCT
GTATTGGGGA CGGGTATTGA TATCATTTAT CCGCGCCGAC ATAAGCAGCT TTATGAGGAT
ATTCAGCGTC AAGGCTGTAT AATAAGCGAG TTTTGGCCGG ATGTGGGGCC TTTTGCGGGC
AATTTCCCGA AACGAAATCG CATTATTAGC GGTCTTTCTT TAGGGACGTT AGTCGTTGAA
GCTTGTCGCA AAAGTGGTTC GCTCATTACC GCAAGATTGG CCATGGAGCT GGGGCGTGAA
GTTTTTGCTG TGCCGGGCTC CATTCTTGGT GGCTTTCATC AAGGTTGCCA TGATTTATTA
CGTGACGGGG CAAAACTTGT GGAAAGTGCG GCCGATATAG TGGAAGAGCT GGCAAGTTTG
ACTGCATTTC ATCTTGAAGA AGTCAACTCC TGCCACCATA TACAGCAGGG TGAGATTTGT
GATTTGCCAT TTTCATCGCT GTTAGCTAGT GTTGGTTATG AAACGACAGC AATTGATGCT
GTAGTCGAAC ATAGTGGGAA AACGATAGAT CTGGTGTTAG AACAAATGCT TGAACTTGAG
TTGCAAGGTT GGGTTGTTGC AGTACCCGGT GGTTACGTCA GAGTAAAGAG GAGCTAG
 
Protein sequence
MDVDDLRQRL EHEKHSLPLS DNLLHSLVID YQKVDAALEW QQQAAHHHLV CFSDPLYPPL 
LKQLTDPPCV LFVKGCVEAL AIPSLAIVGS RNASPGGLQV AYQLAREMTA LGFSICSGMA
MGIDGAAHKA CVDHAGRTLA VLGTGIDIIY PRRHKQLYED IQRQGCIISE FWPDVGPFAG
NFPKRNRIIS GLSLGTLVVE ACRKSGSLIT ARLAMELGRE VFAVPGSILG GFHQGCHDLL
RDGAKLVESA ADIVEELASL TAFHLEEVNS CHHIQQGEIC DLPFSSLLAS VGYETTAIDA
VVEHSGKTID LVLEQMLELE LQGWVVAVPG GYVRVKRS