| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0033 |
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| Symbol | |
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| ID | 1167931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 38024 |
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| End bp | 39160 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637342042 |
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| Product | LysM domain-containing protein |
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| Protein accession | NP_715675 |
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| Protein GI | 24371633 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGCA CCATGAAACG GTTAATTTTA CTTGCGTTAA TGACCTTTAA TAGCACATTG
GTTTTTGCTG ATACTCTCAC GTTGAAAGCC GGGCATCCAG AGTCATATGT GGTAAAGAAA
GGCGATACCC TGTGGGATAT TTCGACAACC TTTCTAAATG ATCCGTGGAA GTGGCCACGT
TTATGGGATG TGAATCCCCA GATTGCCAAC CCTCATTTAA TTTACCCCGG CGATCAGCTC
ACCTTAGTGT TTATTGATGG CCAACCCAGA TTAGTGCGTA ATGGCGCCAG TGTCAGTACC
AGTGAAGCTA AACCCCATAT TCGAAAATCA CCAGAAGGAC GTGTTATCGC TAAAAGCAAT
GCGATACCAG CAGTTGATCT AGCACTAATT CAAAACTATC TCGTTCAAAA CCGTGTCGTT
GATGCCGACT GGTTTATTCA GCAACCTATG GTGCTTGCGG GGGAGAGTCC TTCACGTCAC
CATGTGATTG GCGATGTGAT TTATATCAAT AGTGAATTAC CTTTGCATCA AAAGTTAGGT
GTGTATGAGC GCGGTCGTGA ATTCTTTAAT AAAGAAACAG GCGAGGCTCT CGGACAAGAG
GCGATTTTGG CATCGACTGG ACAGGTGATC GAGTCTGGCA AAGTATCAAA GGTGAAGCTT
CTCAGCAATT TCCGTGAAAC CAAAGCGGGT TTTAGGGTGC TGCCGCTGGA AGATGAGGCG
TTAATGTCGG CCTATTTTAC GCCAAAACCT GCAGAGCTTA AGACGTCTGC TAGCGTATTA
GCGATTGAGT CAAAAATGCG TGAAGCGGGT AAACTCAATG TCGTTTATCT CGATAAAGGT
ACACAGGATG GTGTAAAACC GGGAGAGGTT TTCTCTATTT ATCGTGATGG TGAAGAAATC
GTGATCAATA ACGATGGCCA ACCGGTTCCG GTAATGGAAC GTACTGCCTA TGATGATGTA
GTGGCGTCGC TTTCGTCCGA TCGCTCGCTC AAAATGCCCG ATGTTTATAA TGGTAAATTG
TTAGTATTCA AAGTGTTTGA TAAAGCGAGT CTTGGTTTGA TTGTATCGAC GGAGCGTTCT
GTGCGTGTCG ATGACAAATT AATCGCACCC GACATACTAG CCTTTAGAGG TCAATAA
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| Protein sequence | MDRTMKRLIL LALMTFNSTL VFADTLTLKA GHPESYVVKK GDTLWDISTT FLNDPWKWPR
LWDVNPQIAN PHLIYPGDQL TLVFIDGQPR LVRNGASVST SEAKPHIRKS PEGRVIAKSN
AIPAVDLALI QNYLVQNRVV DADWFIQQPM VLAGESPSRH HVIGDVIYIN SELPLHQKLG
VYERGREFFN KETGEALGQE AILASTGQVI ESGKVSKVKL LSNFRETKAG FRVLPLEDEA
LMSAYFTPKP AELKTSASVL AIESKMREAG KLNVVYLDKG TQDGVKPGEV FSIYRDGEEI
VINNDGQPVP VMERTAYDDV VASLSSDRSL KMPDVYNGKL LVFKVFDKAS LGLIVSTERS
VRVDDKLIAP DILAFRGQ
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