Gene SO_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0027 
Symbol 
ID1167925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp31656 
End bp32210 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID637342036 
Productprotoporphyrinogen oxidase, putative 
Protein accessionNP_715669 
Protein GI24371627 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCA TCCTGGTGCT TTATTTTACC CGAGGAGGCC ATACGGCCAA GATTGCCAAT 
GCAATAGCGG AGCAATTAAC CCTGCGTGGC GCAAAGGTTG ACTTAGTCGA TATCAATAGT 
GCGGCTGCAA CACGAATCAA CTGGTCCGAT TATCAGCTGG TGGCTTTGGG TGCCTGTGTA 
CTCTATGGCA CTTATGATAA GAGTGTATTT CAATTTATTG AGCAACATGT GCAGGCTTTG 
AGTTTTTTGC CAAACAGTTT TTTCTGCGTC AACGTGGTCG CACGTAATCC GGAGAAACGT 
ATTCCTGAAA ACAATAAATA CCTGCAAAAG TTTATCACTC TATCTCCTTG GACTCCCGCA 
GATTTGAAGA TTATTGCTGG TAAAGTCGAT TATCCATCTT GGCCTTGGTA CGACAGATTA 
ATGATCCAGT TAATTATGAA AATCACTAAA GGCCCAACGG ATCCAAAAGC AGTTATTGAT 
TATACCGATT GGGAAGATGT GAAAGTCTAT GCCGACCATC TGCTGACCTT GGTCGAGGTT 
GCTGAACCTG CCTAA
 
Protein sequence
MTRILVLYFT RGGHTAKIAN AIAEQLTLRG AKVDLVDINS AAATRINWSD YQLVALGACV 
LYGTYDKSVF QFIEQHVQAL SFLPNSFFCV NVVARNPEKR IPENNKYLQK FITLSPWTPA 
DLKIIAGKVD YPSWPWYDRL MIQLIMKITK GPTDPKAVID YTDWEDVKVY ADHLLTLVEV 
AEPA