Gene SO_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0025 
Symbol 
ID1167923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp30558 
End bp31082 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content42% 
IMG OID637342034 
Productflavodoxin 
Protein accessionNP_715667 
Protein GI24371625 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAT TAATAATCTA CTCAACCATC GACGGTCAAA CGCTAGAAAT TTGTCGTAAG 
ATTAAAGCAT TTGCTGAGCG GGCGGGTGAA AAGGTCTCCC TCTTTAGCTT AGAACAGGCT
GAAGCTATAA ACCTTGCAGA TGTTGATAAG GTATTGATTG GTGCGAGTAT CCGCTATGGT
AAACATAGAC CTGAGCTTTA CCAATTTGTG AATCGCAACC ATGCGGTGTT AAGCGCGAAA
GTTAATGGTT TTTTTACGGT AAATGTGGTG GCGCGGAAGC CGTTAAAGAA CACCCCAGAA
ACCAATCCTT ATATGCAGAA ATTCCTCAAA TTATCCCTTT GGCAACCACA ACACTTGGCG
GTATTTGCTG GTAAGATTGA TTACCCTAAA TATGGCTTAT TCGACCGCAC AATGATCTGT
TTTATCATGT GGATGACTAA GGGGCCAACG GATCTTAAGG GCACGTTTGA GTTTACCGAT
TGGGCTAAAG TCGAAGCTTT TGGCACTCAT TTTAGTAAGC TATAA
 
Protein sequence
MQTLIIYSTI DGQTLEICRK IKAFAERAGE KVSLFSLEQA EAINLADVDK VLIGASIRYG 
KHRPELYQFV NRNHAVLSAK VNGFFTVNVV ARKPLKNTPE TNPYMQKFLK LSLWQPQHLA
VFAGKIDYPK YGLFDRTMIC FIMWMTKGPT DLKGTFEFTD WAKVEAFGTH FSKL