Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0025 |
Symbol | |
ID | 1167923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 30558 |
End bp | 31082 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637342034 |
Product | flavodoxin |
Protein accession | NP_715667 |
Protein GI | 24371625 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAT TAATAATCTA CTCAACCATC GACGGTCAAA CGCTAGAAAT TTGTCGTAAG ATTAAAGCAT TTGCTGAGCG GGCGGGTGAA AAGGTCTCCC TCTTTAGCTT AGAACAGGCT GAAGCTATAA ACCTTGCAGA TGTTGATAAG GTATTGATTG GTGCGAGTAT CCGCTATGGT AAACATAGAC CTGAGCTTTA CCAATTTGTG AATCGCAACC ATGCGGTGTT AAGCGCGAAA GTTAATGGTT TTTTTACGGT AAATGTGGTG GCGCGGAAGC CGTTAAAGAA CACCCCAGAA ACCAATCCTT ATATGCAGAA ATTCCTCAAA TTATCCCTTT GGCAACCACA ACACTTGGCG GTATTTGCTG GTAAGATTGA TTACCCTAAA TATGGCTTAT TCGACCGCAC AATGATCTGT TTTATCATGT GGATGACTAA GGGGCCAACG GATCTTAAGG GCACGTTTGA GTTTACCGAT TGGGCTAAAG TCGAAGCTTT TGGCACTCAT TTTAGTAAGC TATAA
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Protein sequence | MQTLIIYSTI DGQTLEICRK IKAFAERAGE KVSLFSLEQA EAINLADVDK VLIGASIRYG KHRPELYQFV NRNHAVLSAK VNGFFTVNVV ARKPLKNTPE TNPYMQKFLK LSLWQPQHLA VFAGKIDYPK YGLFDRTMIC FIMWMTKGPT DLKGTFEFTD WAKVEAFGTH FSKL
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