| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0021 |
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| Symbol | fadB |
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| ID | 1167919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 24493 |
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| End bp | 26643 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637342030 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | NP_715663 |
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| Protein GI | 24371621 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG
TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGATAGAG AAACACTCGC CTCACTCGAT
GCCGCATTAG ACAGCATCAA ACAACAATCA AACATTCAGG CATTAGTGCT CACATCAGGT
AAAGATACCT TTATCGTCGG CGCTGACATT ACTGAATTTT TAGGCTTATT CGCACAAGAT
GATGCAGTAC TGCTCTCTTG GGTTGAACAG GCCAACGCCG TATTCAATAA ACTCGAAGAT
TTACCTTTCC CAACTGCTTC AGCCATTAAA GGTTTTGCCT TAGGCGGCGG TTGTGAAACC
ATTTTAGCGA CAGATTTCCG TATTGCTGAC ACCACGGCAA AAATCGGCTT ACCTGAAACC
AAACTGGGTA TTATCCCAGG CTTTGGCGGT ACTGTACGTC TACCACGCGT GATTGGTGCT
GACAACGCTC TCGAGTGGAT CACCACAGGC AATGAGCAGC GCGCTGAAGA TGCATTAAAA
GTCGGTGCCG TTGACGCCGT TGTTGCACCA GAAGCCTTAG AAGTTGCGGC GATTCAAATG
CTCAAAGATG CTGTCGCAGA AAAGCTTGAT TGGCAAGCGC GTCGCCAACG CAAATTATCG
CCACTGACAC TGCCTAAACT CGAAGCCATG ATGTCTTTCA CTACGGCTAA AGGCATGGTT
TTCTCTGTCG CAGGCAAACA TTACCCAGCA CCAATGGCAG CGGTAAACGT AGTTGAGCAA
GCAGCAACCA AAGGCCGCAG CGACGCATTA CAAATTGAGC ATCAGGCTTT CATCAAGTTA
GCTAAGACTG ATGTGGCCAA GGCGCTTATC GGTATCTTCC TTAATGATCA ATTCGTTAAA
GGCAAAGCCA AGAAAGCTGG CAAGCTGGCC AAAGCAGTAA ATAGCGCCGC CGTATTAGGT
GCAGGCATCA TGGGCGGCGG CATCGCTTAC CAAAGCGCCA GCAAAGGCAC GCCGATCGTG
ATGAAAGATA TTGCCCAGCC AGCATTAGAT TTAGGTCTCA ATGAAGCGGC AAAACTGCTA
TCAGCGCAAG TTGCCCGTGG CCGCTCTACC CCTGAAAAAA TGGCAAAGGT ACTGAACAAC
ATCACCCCAG CTCTAGAATA TGCACCAGTG AAACATGCCG ACGTGGTTGT TGAAGCCGTG
GTTGAGCATC CAAAAGTGAA AGCACAGGTA CTGGCAGAGG TTGAACAATA CGTCAGTGAA
GATGCGATTA TCGCTTCTAA CACTTCAACG ATTTCAATCA GCTTACTCGC TAAGAGCATG
AAGAAGCCAG AGCGTTTCTG CGGTATGCAC TTCTTCAACC CTGTGCACAA AATGCCATTG
GTTGAAGTTA TCCGTGGCGA GCACAGCTCA GAAGAAACCA TCGCATCAGT TGTCGCTTAC
GCCAGCAAAA TGGGTAAAAC CCCAATCGTT GTTAACGATT GCCCAGGCTT CTTCGTTAAC
CGCGTCCTCT TCCCTTACTT TGCCGGCTTT AATGGTCTAC TCGCCGAAGG TGGCGACTTT
GCTGCTATCG ATAAAGTGAT GGAAAAACAA TTCGGCTGGC CAATGGGCCC CGCTTATCTG
CTAGACGTTG TCGGCCTAGA TACAGGTCAC CACGCGCAAG CAGTAATGGC CGAAGGCTTC
CCTGATCGTA TGGGCAAATC TGGCAATGAC GCGATTGACG TGATGTTTGA GAACAAACGT
CTCGGCCAAA AGAACGGTAA GGGTTTCTAC GCTTACTCAG TGGATAGCCG CGGCAAGCCA
AAGAAAGATG TCGACCCAAC CAGCTATGAG CTGCTGAAGG CCGCTTTTGG TGAGCAAAAA
GCATTCGATG CGGATGAAAT CATCGCCCGC ACTATGATCC CAATGATTAT CGAAACCGTT
CGCTGTTTAG AAGAAGGCAT TGTGGCATCA CCTGCCGAAG CGGATATGGG CTTAGTCTAC
GGTTTAGGCT TCCCGCCATT CCGTGGTGGT GTGTTCCGTT ACTTAGACAC CATGGGCGTT
GCCAACTTTG TGGCTTTAGC AGACAAATAC GCGCATTTAG GTGGTTTGTA TCAAGTCACC
GACGCCATGC GTGCCCTTGC AGCCAACAAC GGTAGCTACT ACCAAGCCTA A
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| Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQQS NIQALVLTSG
KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET
ILATDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG NEQRAEDALK
VGAVDAVVAP EALEVAAIQM LKDAVAEKLD WQARRQRKLS PLTLPKLEAM MSFTTAKGMV
FSVAGKHYPA PMAAVNVVEQ AATKGRSDAL QIEHQAFIKL AKTDVAKALI GIFLNDQFVK
GKAKKAGKLA KAVNSAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL
SAQVARGRST PEKMAKVLNN ITPALEYAPV KHADVVVEAV VEHPKVKAQV LAEVEQYVSE
DAIIASNTST ISISLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKSGND AIDVMFENKR LGQKNGKGFY AYSVDSRGKP
KKDVDPTSYE LLKAAFGEQK AFDADEIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRALAANN GSYYQA
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