| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0014 |
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| Symbol | glyS |
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| ID | 1167912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 15180 |
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| End bp | 17246 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342023 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | NP_715656 |
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| Protein GI | 24371614 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG AAAACTTACT CATCGAGTTA GGCACTGAAG AGCTGCCGCC AAAGGCGCTA
CGTAAACTGG CTGAGTCTTT CTTAGCGAAC TTTACTGAAG AATTAACCAA AGCCGATTTA
GCTTTTAAAT CCGCGGTTTG GTATGCAGCG CCCCGTCGTC TGGCGCTTAA TATTACTGAA
CTCGCTATTG CCCAAGCAGA TAAAATCGTT GAAAAACGCG GCCCGGCGGT CAGCTCAGCC
TTTGATGCCG GAGGTAAACC TACAAAAGCT GCCGAAGGTT GGGCACGTGG CAACGGTATT
ACTGTCGATC AGGCAGAACG TTTAGTGACC GACAAAGGTG AATGGCTGGT TTATAACGCT
AAAGTTGAAG GCGTTGAAAC TAAGAGCTTA GTCGCTGCTA TGGCACAACG TGCGCTGGAT
AAGTTACCTA TTCCAAAGCC AATGCGCTGG GGAAGTAGTA AAACGCAATT TATCCGCCCA
GTTCACACCG CCACTATGTT ATTAGGCAGC GAATTAATCG AAGGCGAATT GCTCGGGATT
AAATCAGCTC GCAATATCCG TGGTCACCGC TTTATGGGTA CCGGTTTTGA GCTTGACCAT
GCGGACAACT ACCTGACACT GCTAAAAGAA AAAGGTAAAG TCATTGCCGA TTATGAAAGC
CGCAAAGCAT TAATCAAAGC CGATGCCGAA AAAGCGGCCG CCAAGATTGG TGGCACCGCC
GATATCGAAG ATGCTCTACT GGAAGAAGTG ACCTCTTTGG TTGAATGGCC AGTAGTATTA
ACTGCAAGCT TTGAAGAAAA ATTCTTAAGC GTACCTTCTG AAGCCTTGGT TTACACCATG
AAGGGCGATC AAAAGTACTT CCCGGTATTC GATGATGCGG GCAAGTTACT GCCAAACTTC
ATCTTTGTCG CGAATATCGA ATCAAAAGAT CCCGCGCAAA TTATCTCTGG TAACGAGAAA
GTGGTTCGTC CACGCTTGGC TGATGCTGAG TTCTTCTTTA ATACCGATAA GAAGCACACG
CTAGAATCAC GCTTACCAAG CCTTGAGACC GTCTTGTTCC AGCAACAGCT CGGCACCTTA
AAAGACAAAG TGACTCGTAT CTCTGCCCTA GCCGCCTTTA TTGCCGAGCA AACAGGTGCA
AATGCCGTTG ATGCAGCTCG TGCAGGTTTA TTGTCTAAAA CAGACTTAAT GACCAATATG
GTGATGGAGT TTACCGATAC GCAAGGCACT ATGGGCATGC ATTACGCCCG CCTAGACGGT
GAAACTGAAG CCGTAGCGTT AGCCATGGAG GAACAATATA AGCCAAAGTT TTCTGGCGAT
ACGGTTCCAA CAGCTGCCGT TTCTTGCGCC GTGGCATTAG CGGATAAGCT TGATACCTTA
GTCGGTATCT TCGGTATTGG TCAGGCACCT AAGGGCGCTG CCGACCCATT CGCACTACGT
CGCGCCGCTA TCGGTGTACT GCGTATTATC GTTGAGAATA AACTGCCACT GGACTTAGTA
ACGCTAATAG CTAAGGCTCA GGAACTGCAT GGTGCTAACT TAAGTAACGC AAACGCAAGC
GAAGAAGTAC TCGAGTTCCT CATGGCTCGT TTCCGTGCTT GGTACCAAGA TAAAGGTATC
AACGTTGACG TGATCCTTGC CGTATTAGCC CGCCGTCCAA CTCGCCCAGC CGACTTTGAT
AGCCGCATTA ACGCAGTATC ACACTTCAGA GGTTTAGAAG CCTCTAGCGC TCTGGCAGCA
GCGAATAAGC GAGTGTCTAA TATTCTGGCA AAGGTTGAAG GTGAATTACC TTCTAGTGTG
AATGTCGCGT TATTAAGTGA AGCTGCCGAG CAAGCATTAG CAGCTAAGCT TGCCGAGCTG
CAGCCTCAGC TTGCACCTTT ATTTGCTAAC GCAGATTACC AACAAGCCTT AACCTTACTG
GCGAGTTTAC GTGAAAGCGT CGATCAGTTC TTTGAGGATG TAATGGTGAT GGCGGATGAT
GCAGCGCTGC GTAACAACCG TTTGGCCCTG CTCAACAACC TACGTGAGCA GTTCCTGCAT
GTGGCGGATA TTTCTCTGCT TCAGTAA
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| Protein sequence | MNFENLLIEL GTEELPPKAL RKLAESFLAN FTEELTKADL AFKSAVWYAA PRRLALNITE
LAIAQADKIV EKRGPAVSSA FDAGGKPTKA AEGWARGNGI TVDQAERLVT DKGEWLVYNA
KVEGVETKSL VAAMAQRALD KLPIPKPMRW GSSKTQFIRP VHTATMLLGS ELIEGELLGI
KSARNIRGHR FMGTGFELDH ADNYLTLLKE KGKVIADYES RKALIKADAE KAAAKIGGTA
DIEDALLEEV TSLVEWPVVL TASFEEKFLS VPSEALVYTM KGDQKYFPVF DDAGKLLPNF
IFVANIESKD PAQIISGNEK VVRPRLADAE FFFNTDKKHT LESRLPSLET VLFQQQLGTL
KDKVTRISAL AAFIAEQTGA NAVDAARAGL LSKTDLMTNM VMEFTDTQGT MGMHYARLDG
ETEAVALAME EQYKPKFSGD TVPTAAVSCA VALADKLDTL VGIFGIGQAP KGAADPFALR
RAAIGVLRII VENKLPLDLV TLIAKAQELH GANLSNANAS EEVLEFLMAR FRAWYQDKGI
NVDVILAVLA RRPTRPADFD SRINAVSHFR GLEASSALAA ANKRVSNILA KVEGELPSSV
NVALLSEAAE QALAAKLAEL QPQLAPLFAN ADYQQALTLL ASLRESVDQF FEDVMVMADD
AALRNNRLAL LNNLREQFLH VADISLLQ
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