Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BRA1190 |
Symbol | |
ID | 1165643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004311 |
Strand | - |
Start bp | 1192353 |
End bp | 1194338 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637332277 |
Product | TonB dependent receptor domain-containing protein |
Protein accession | NP_700343 |
Protein GI | 23500903 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0340628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTTCA CGAGAACGCT GGTGCTCGCC AGCACATTTC TGCTTGCCAC CGTCGCCACA TCGCAGGCTC AGGAAGTAAA GCGTGATACG AAAAAGCGGG GTGAAGTTGT CCTTAAACCC ATTACGATCA TAAGCCACGG CAAGGACAAT ATCGAAGCGA CCGGCGGCAC TGTCCTTACT TATAAAGATA TTGAAAAGCT GCAACCTGCC AACGTTTCCG AGTTGTTTTC GCGCCAGTCC TCCATCGCTG TTTCCGGCGG TGGCGGCCCG TCGAAGCGTA TTCACATTCT TGGCATGGAG CAATCCAATC TGGCGGTCAG TGTGGATGGC GTGCCGCAAA CGGCGACAAG CTGGCACCAT ACGGGTTCCA ACGTAATCGA TCCTGCGTTT CTCAAGCGCG TGGAAGTGGA GGCCGGAGCG GCCGCCGCAG ATTCCGGCTT TGGCGCGGCC GCTGGTGCGA TCCGCTACGA GACCGTTAAT GCGCTCGATC TGCTGGAGCC GGGCAAAACC TTCGGTGCGC GCATCATAGG TTCCTACGGT ACAAATGGCA GGGGTTTTTC CGGCAGTACC GCCGCCTATG GCCTCAAGGA TGGCTTCGAC TGGCTGCTGA TGCTGCATGG CACGTCGGGC CACAATTATA AAAACGGCGA TGGAACCGAA ATACTCGGCA CCGAGCCTGC CGCGCGCAAT ATTCTGGGCA AGGCCGGTTA TGAATTCGAC GGCAACCGCA TCGATATTGG CTATGAACGC AGCCGCGACA AGGCCGACCG TCTTATCAAG ATGAATATGG GGCTGCCCGG CGACACCGAA TATCCGCTTG AGGTTGCGCG TGATTCCGTG AACATAAAAT ATACCCGTAC CGATGCTACG GACATGTGGG ATCCGGAGGT GCAGTTCTAT TACAATCGCA ACGATTATTG GCGCAACGAT TATCAGAACA GGACAAACGG CAACATGATC CTCAAGGAGG ATCTGTATGG CGGCAAGTTG CAGAATACTT TCACGATCGA CTACGGCAAG ATTACCGCCG GTATCGATTT TGGCAAGCAC GACTACAATA CGGACAATTA CGGTCATAAT GACCGCCGCT ACCGCAAGTT CAACACCCAG CAGGTCGGTG CATTCACGCA AGGCCGGTTT GAATTCGATA ACGGCTTCAG CCTTTCGACA GGTGCCCGCT ATGACTATAG CCGGTTTGCG GACTGGAACG ATGAGGTGTT TTCAGATAGC GGCGCCAGCG TGAACGGCAC GCTATCATAC AAGTTCAACG AGCATATCGA GGTTTTTGCC GGTGCTTCAC GGACCTGGCT TGGCTACGTC CTCGGTGATT ACGGCTATGT CCACGCCCGC AATAATGCTT TCTATACCGA CCCGACCTTC AGCCCCGGAA GGGCGCGCAA TTATAAAGCG GGTGTGAATT TCGGCGGTGC AGACTGGAGT GCCGGCATTA CGCTTTTCGA CACGCGCATC GCCGGTCTGC CGAATTATGA CAGCCAGAAG CTTGGCAACG ATCCGGAAGA ATATCGTTCG CGAGGCTTTA CCCTCAATGC GCGCTATATC TGGAACTACA CGACCATTGG CGCAACCTTT ACCAAGGCCA AGGTTACGGC GGGCGACGAC CCAGTCTTGC CGAACAGCGG CAGCTTCATG CCGATCGGTG ATATGGCGAC GCTTTTCATC GACCAGGAAA TCCCCGACTA CAATATGAAA GTGGGTGCTA CGCTGGCCTG GGCGGGTAGA ATTTCAGACG AGGCTGCTAC TGCTGCCAAC TTCTACGATC AGCCTGCCTA TACGGTTGTC AACGCCTATG CGGAATGGAA TCCGCCAGCG GTTAAGAATA TGACGTTGCG CGTGGGTGTC GAGAACCTGT TCAACGAAAA CTATTACGAG AGAACCAGCT TCGCGCCGAG TCAGAAGCGT GGTGGCATCG ATCCGGTTTG GGCGCCGGGC CGGACCTTCA CTTTCCAGAC GGCCTTCAAG TTCTGA
|
Protein sequence | MKFTRTLVLA STFLLATVAT SQAQEVKRDT KKRGEVVLKP ITIISHGKDN IEATGGTVLT YKDIEKLQPA NVSELFSRQS SIAVSGGGGP SKRIHILGME QSNLAVSVDG VPQTATSWHH TGSNVIDPAF LKRVEVEAGA AAADSGFGAA AGAIRYETVN ALDLLEPGKT FGARIIGSYG TNGRGFSGST AAYGLKDGFD WLLMLHGTSG HNYKNGDGTE ILGTEPAARN ILGKAGYEFD GNRIDIGYER SRDKADRLIK MNMGLPGDTE YPLEVARDSV NIKYTRTDAT DMWDPEVQFY YNRNDYWRND YQNRTNGNMI LKEDLYGGKL QNTFTIDYGK ITAGIDFGKH DYNTDNYGHN DRRYRKFNTQ QVGAFTQGRF EFDNGFSLST GARYDYSRFA DWNDEVFSDS GASVNGTLSY KFNEHIEVFA GASRTWLGYV LGDYGYVHAR NNAFYTDPTF SPGRARNYKA GVNFGGADWS AGITLFDTRI AGLPNYDSQK LGNDPEEYRS RGFTLNARYI WNYTTIGATF TKAKVTAGDD PVLPNSGSFM PIGDMATLFI DQEIPDYNMK VGATLAWAGR ISDEAATAAN FYDQPAYTVV NAYAEWNPPA VKNMTLRVGV ENLFNENYYE RTSFAPSQKR GGIDPVWAPG RTFTFQTAFK F
|
| |