Gene BRA1031 details

Gene Information

• Locus tag: BRA1031
• Symbol: dapE
• ID: 1165476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004311
• Strand: +
• Start bp: 1017642
• End bp: 1018829
• Gene Length: 1188 bp
• Protein Length: 395 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637332120
• Product: succinyl-diaminopimelate desuccinylase
• Protein accession: NP_700194
• Protein GI: 23500754
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
• TIGRFAM ID: [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTAC CTGTCAATCC CGCCGATAAT CTTGCCGCCC TCATCCGCTG CCCATCCGTC 
ACACCCGCCG AAGGGGGGGC GCTGACTGCA CTGGAAAAAA TGCTGAAGCT CATGGGCTTT 
TCAGCAAACC GCCCCGTTTT CAGCGATGAC AACACGCCCG ATATTGAAAA TCTCTATGCC 
CGCAAATCCG GCAATGGGCC ACATCTGATG TTCGCAGGCC ACACCGATGT CGTGCCGCCC 
GGCGATGAAA AGGACTGGAA GCACCCGCCC TTTGCCGCAG CAATCGAGGA CGGCGTGATG 
TATGGCCGTG GCGCGGTGGA CATGAAAGGC GGCATCGCCT GTTTCGTGGC CGCGGTTGCC 
CGCCACATCG AAAAGCATGG CAACATCAAG GGCAGCATTT CCTTTCTCAT CACCGGCGAT 
GAGGAAGGCC CGGCCGTCAA CGGCACGGTG AAACTGCTCG AATGGGCAAA ACAACGCGGC 
GAAAGCTGGG ATGCATCGAT CGTCGGTGAA CCAACCAACC CGAACGCGCT TGGCGACATG 
ATCAAGATCG GGCGGCGCGG TTCGCTCTCC GGCACGATTA CCGTTCATGG CGTGCAGGGC 
CATGCCGCCT ATCCGCATCT GGCTGAAAAT CCGGTCCGTG GCATCGTCAC GCTGGTTGAC 
AGCCTGCTTT ACCCCGCCTT CGATGAAGGC ACGGCAAATT TCCAGGCCAG CAATCTGGAA 
GTCACCACCA TTGATGTGGG CAACAAGGCC ACCAATGTCA TCCCGAACAA GGCGACCGCC 
TCGTTCAACA TCCGCTTCAA TGACACATGG ACGGCCGAAA GCCTTCAAGC GGAAATCATC 
TCCCGGCTGG AAAGGGCCGC GCGCGACAAC CGCCTGCGCC AGGGGCGCGA AACGCCGATC 
AAATACGAAC TGACCTGGCG TGAGCGGCCA AGCCATGTCT TCCTCACCCA TGATGAAAAA 
CTGATCGGCA CGCTCACCGC ATCGGTAGAG GCCGTAACCG GCAAACGCCC GGAACTGTCC 
ACTTCAGGCG GCACGTCCGA TGCCCGCTTC ATCAAGGATT ATTGCCCGGT GGTGGAGTTT 
GGCCTTACGG GCCAGACCAT GCATATGGTT GATGAGCGCG TGGCCCTTGC CGACCTCGAA 
GGCCTGACGC AGATTTATGA ACGCTTCATC GCGGATTTCT TTGGGTAA 

 

Protein sequence

MTLPVNPADN LAALIRCPSV TPAEGGALTA LEKMLKLMGF SANRPVFSDD NTPDIENLYA 
RKSGNGPHLM FAGHTDVVPP GDEKDWKHPP FAAAIEDGVM YGRGAVDMKG GIACFVAAVA 
RHIEKHGNIK GSISFLITGD EEGPAVNGTV KLLEWAKQRG ESWDASIVGE PTNPNALGDM 
IKIGRRGSLS GTITVHGVQG HAAYPHLAEN PVRGIVTLVD SLLYPAFDEG TANFQASNLE 
VTTIDVGNKA TNVIPNKATA SFNIRFNDTW TAESLQAEII SRLERAARDN RLRQGRETPI 
KYELTWRERP SHVFLTHDEK LIGTLTASVE AVTGKRPELS TSGGTSDARF IKDYCPVVEF 
GLTGQTMHMV DERVALADLE GLTQIYERFI ADFFG