| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0964 |
|---|
| Symbol | |
|---|
| ID | 1165408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 953086 |
|---|
| End bp | 953973 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637332055 |
|---|
| Product | TPR domain-containing protein |
|---|
| Protein accession | NP_700130 |
|---|
| Protein GI | 23500690 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.166963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAT TGGCGATGCG CTTAAAGGTG ATGCAATTGT CTGAAACGGA GGTTTCGGGA
ATTGAGGCGT CGGGTGGAGC AGGCCGAAAC GGCCTTATCA TCGCCGCCGC ACTTCTGGCT
TTGACCGTCG CCGGGTGCCA AAGTACCAAT TCGACGCTCA GCACTGTCGA TAGGGCACAG
GGATCGAGCG AGAATATCAG TTCGCTGACG AGCGTGATCC AGAGCAATCC GCGCGATCCC
GAAGGCTATA ATGTTCGCGG CTCCGCTTAT GGCAAGGCCG GACGCTACAA GGAAGCGATG
CGCGATTTCG ATCAGGCGAT CGCGCTTAAC CCGAATTTCT ATCAGGCCTA TGCCAACCGT
GCGCTGGTCG ATCGCTATAT GGGTGACAAC AATAAGGCCG TGCAGGACTA CAGCCGCGCT
ATCCAGCTTA ATCCGCAATA TGACGCCGCC TATATCGGCC GTGGCAATGT CTATCGTCAG
GCGGGTCATC TCGATCAGGC ACTCAACGAT TTCAACCAGG CCATTGCCTT GCGGACCACA
GATGGCCGCG CCTATCACAA TCGCGGCCTG ATCTATCAGG CCAAGGGCCT GCATAAGCAG
GCCATCGAGG ACTTCTCGAA AGCAATTTCG CTCAATTCCA CTGCGCCTGA ACCCTATAAC
GGGCGCGGAA TTTCCTATGT GGCGCTGGGT GATTACGATA ACGCTTTCGA CGATTTCAAC
ACGGCGATCA CGCTCGACCA GAATGTGGCC GAAAGCTGGG CCAATCAGGC GCTGGTCTAC
GAACACAATG GCGACAAGGC AAAGGCTGCA AATTCTTACG CCCGCGCCGT GCAGCTCGAC
CCGAAGTATA AGCCTGCGAA AGACGGTCTG GCCCGCACGC GGGGTTAA
|
|---|
| Protein sequence | MLQLAMRLKV MQLSETEVSG IEASGGAGRN GLIIAAALLA LTVAGCQSTN STLSTVDRAQ
GSSENISSLT SVIQSNPRDP EGYNVRGSAY GKAGRYKEAM RDFDQAIALN PNFYQAYANR
ALVDRYMGDN NKAVQDYSRA IQLNPQYDAA YIGRGNVYRQ AGHLDQALND FNQAIALRTT
DGRAYHNRGL IYQAKGLHKQ AIEDFSKAIS LNSTAPEPYN GRGISYVALG DYDNAFDDFN
TAITLDQNVA ESWANQALVY EHNGDKAKAA NSYARAVQLD PKYKPAKDGL ARTRG
|
|---|
| |