Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BRA0888 |
Symbol | |
ID | 1165331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004311 |
Strand | + |
Start bp | 870734 |
End bp | 872632 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637331979 |
Product | major facilitator family transporter |
Protein accession | NP_700055 |
Protein GI | 23500615 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTCT CGTCAAGCGC CGCGGCCGGC GCACAAAAAA TGACGGGCGA AGAGCGCAAG GTCATCTTTG CGTCCTCGCT CGGTACCGTC TTTGAATGGT ATGACTTCTA TCTCTATGGA ACGCTGGCGT CCTTTATCGG CGCGGCCTTC TTCAACGAAT ACCCGGAAGC AACCCGAAAC ATCTTCGTTC TTCTGGCTTT TGCGGCAGGT TTCCTTGTGC GCCCCTTCGG CGCTCTCGTC TTCGGACGCA TCGGCGACCT CGTCGGCCGT AAATATACAT TCCTTGTTAC CATCGTCATC ATGGGCGGAT CGACCTTCCT GGTCGGCCTT CTGCCCGGCT CCGCCTCGCT CGGCATCTTC GCACCGATCA TCCTGATTGC GCTGCGCATG TTGCAGGGGC TGGCGCTCGG CGGCGAATAT GGCGGCGCGG CAACCTATGT GGCCGAACAT GCGCCGAACA ACCGTCGCGG CTTCTTCACT TCATGGATCC AGACCACGGC AACGCTCGGC CTGTTCCTGT CGCTGCTCGT GATCCTGGGC GCCCAGACCT TGCTCAGCAA GGACGCCTTC GCGGCCTGGG GCTGGCGTAT TCCGTTCCTC GTATCGGTTC TCCTGCTCGG TATTTCCGTC TGGATCCGCA TGCAGATGAG CGAATCGCCC GCGTTCAAGC GCATGAAGGA AGAAGGCAAA ACCTCCAAGG CCCCGCTTTC GGAAGCTTTC GGCCAGTGGA AGAATGCCAA GATCGCCCTC ATCGCCCTTT TCGGCCTCAC CGCCGGTCAG GCCGTTGTCT GGTATTGCGG ACAGTTTTAC GCCCTCTTCT TCCTTCAGAA CGTGTTGAAG GTGGAAAACC AGTCGGCCAA CATCATGGTG GCAATTGCCC TCCTGATCGG CACCGGCTTC TTCGTGATTT TTGGCTGGCT TTCGGACAAG ATCGGCCGCA AGCCGATCAT CATGGCTGGT CTCATCCTCG CCGCCGTCAC CTACTTCCCG CTGTTCAAGG CGCTGACCAA TGCCGCCAAC CCGGCGCTGG CGCAGGCCGA ACAGACCGTG AAGGCAACGG TTACGGCAGC ACCCGGCGAC TGTAACTTCC AGTTCAACGC CACCGGCACG TCCAAGTTCA CCACCTCCTG CGATGTTGCA ACAAGCTTCC TCGCCAAGAG TTCGGTGCCT TACGAAACCG TGCAGACGGC GGCGCCCGGA ACACCTGCGA CCATCACCAT CGGCGATACC ACGATCCAGT CTTATGACGC GGTTCAGGCC GATGCGGATG CCGCAGCCAA GCAGGCAGCA CTTGCCCATG GCGTGAACCT TGCCTTGCAG CAGGCTGGTT TCCCGCTCGT TCGCGATACG GCGAAAGTGC CGGATAGCAA GCTCGACGCC TTCGTCGCCG CCAACCCGGA ATTGCAACTC AATGCAGATG CCATTCGCGC TGGCGACGCC AAGACGATGG TTTCCGCTGC TGACCTCGTG AAGCAGAAGC TTCTTACCCA GAGCGAAGCT GAAAGCCTTG GCGTCAGTTC CGAACAGGCC GTTTATTCCA TCCCGAATGC GGGCGCATTC AAGATGGTTG CTGATCCTGC ACAGGTGAAC TGGGTGCTGA CCATCGCGAT CCTGACTATC CTCGTCATCT ACGTGACGAT GGTATATGGC CCGATTGCAG CAATCCTCGT CGAGATGTTC CCAACCCGCA TCCGCTATAC CGGCATGTCG CTGCCTTATC ATATCGGCAA CGGCTGGTTC GGCGGCCTGC TTCCCGCTGG CGTGTTCGCG CTCAGCGCGG CCAAGGGCGA CATCTATTAC GGTCTCTGGT ACCCGATCAT CATCGCATCC GTAACCTTCG TGATCGGCAT GCTGTTCGTG AAGGAAACCA AGGGAGTCGA TCTCAACAAG GTCGATTGA
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Protein sequence | MAVSSSAAAG AQKMTGEERK VIFASSLGTV FEWYDFYLYG TLASFIGAAF FNEYPEATRN IFVLLAFAAG FLVRPFGALV FGRIGDLVGR KYTFLVTIVI MGGSTFLVGL LPGSASLGIF APIILIALRM LQGLALGGEY GGAATYVAEH APNNRRGFFT SWIQTTATLG LFLSLLVILG AQTLLSKDAF AAWGWRIPFL VSVLLLGISV WIRMQMSESP AFKRMKEEGK TSKAPLSEAF GQWKNAKIAL IALFGLTAGQ AVVWYCGQFY ALFFLQNVLK VENQSANIMV AIALLIGTGF FVIFGWLSDK IGRKPIIMAG LILAAVTYFP LFKALTNAAN PALAQAEQTV KATVTAAPGD CNFQFNATGT SKFTTSCDVA TSFLAKSSVP YETVQTAAPG TPATITIGDT TIQSYDAVQA DADAAAKQAA LAHGVNLALQ QAGFPLVRDT AKVPDSKLDA FVAANPELQL NADAIRAGDA KTMVSAADLV KQKLLTQSEA ESLGVSSEQA VYSIPNAGAF KMVADPAQVN WVLTIAILTI LVIYVTMVYG PIAAILVEMF PTRIRYTGMS LPYHIGNGWF GGLLPAGVFA LSAAKGDIYY GLWYPIIIAS VTFVIGMLFV KETKGVDLNK VD
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