Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BRA0803 |
Symbol | nikB |
ID | 1165245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004311 |
Strand | - |
Start bp | 785829 |
End bp | 786773 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637331899 |
Product | nickel transporter permease NikB |
Protein accession | NP_699976 |
Protein GI | 23500536 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.226349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCGCCT TCATTATCCG CCGGGTGATC CTGCTTGTCC CGATGTTGTT CGGGGCATCG CTGGTCATTT TCCTGATGCT GCGGCTTGGC CCGAGCGACC CCGCCATGGA TTATCTGCGC CTGTCGAAAG TGCCTCCAAC GCCGCAGGCG TTGGAGAGCG CCCGCCAGAT GCTCGGGCTG GATCGGGCAA TTACGACCCA GTATTTCGAC TGGCTTGGAA AGGCGCTCCA TGGTGATTTC GGGATATCGT TTGCGACCCA ACGGCCGGTC CTGCCGGATT TGCTCTACTT CTTGCCGGCC ACGCTTCAGC TTGCAGGTGT CGCGCTTGTG CTGACACTCG GCCTGTCCAT TCCGCTCGGT ATGTGGGCGG CCCGACACCG GGAGGGCTGG CAGGATCAGG TGGTCCGGTT TGTTGCCTTC CTTGGCGTAT CCATGCCCAA CTTCTGGCTC GGCTTCCTGT TGGTTCTGGT GTTTTCCATC CAGCTTGGCT GGTTGCCGCC AATGGGGCGC GGCGGCTTTG CGCATATGAT TATGCCAGCC ATCGCGATTT CCTTCATGTC GCTCTCCATC AATGCGCGCT TGCTGAGGGC CAGTATGCTG GAAGTGTCAG GACAAAGGCA TGTGCGTTAT GCCCGCCTGC GCGGCCTGTC TGAGCGCAGT GTAGAGCGCA GCCATGTGCT GAGAAATGCC TGGCTGCCGA TCATCACGGC AACGGGGATG CATATCGGTG AACTGATCGG CGGTACACTG GTCATCGAAA GCATTTTTGG CTGGCCGGGC GTCGGGCGCT ATGCCGTCTC GGCCATCCTG AACCGCGACT ATCCCGTTAT CCAGTGTTTT ACGCTGGTTA TGGTGACGAT CTTTGTCATC TGCAATCTGA TCGTGGATGT CGTTTATGCC TGGGCCGATC CGCGCATCCG CCTTTCTGCG GAGGGTGCGG AATGA
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Protein sequence | MFAFIIRRVI LLVPMLFGAS LVIFLMLRLG PSDPAMDYLR LSKVPPTPQA LESARQMLGL DRAITTQYFD WLGKALHGDF GISFATQRPV LPDLLYFLPA TLQLAGVALV LTLGLSIPLG MWAARHREGW QDQVVRFVAF LGVSMPNFWL GFLLVLVFSI QLGWLPPMGR GGFAHMIMPA IAISFMSLSI NARLLRASML EVSGQRHVRY ARLRGLSERS VERSHVLRNA WLPIITATGM HIGELIGGTL VIESIFGWPG VGRYAVSAIL NRDYPVIQCF TLVMVTIFVI CNLIVDVVYA WADPRIRLSA EGAE
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