| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0802 |
|---|
| Symbol | nikC |
|---|
| ID | 1165244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 784960 |
|---|
| End bp | 785832 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637331898 |
|---|
| Product | nickel transporter permease NikC |
|---|
| Protein accession | NP_699975 |
|---|
| Protein GI | 23500535 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATT CAGCTTCCAT GGTTTGTGCC TCGAAGACGG GCTTTCTGTC GGTTCCGCGG
CAGTGGCCGG TTCGTCTTGC CTGCATCATT GTCCTGTTAT TATTGGTCGC GGCTGTCGCT
GGCCCCTGGA TTACCCCTTA TAACCCGGAT GATGTCGATC TGGTGCGCCG GCTTCAATCA
CCAAGCCTTG CCCATTGGCT GGGCACCGAT CACCTTGGCC GCGACATGCT CTCACGCCTG
ATCGCAGGTG TGCGGGTATC GCTCGGTTCT GTTGTCATTA CCCTGGCGCT GATCCTGGCC
ATAGGAATTG TCATCGGGGG CGCGGCGGGC TTTCTCGGCG GGCGGGCGGA TCAGGTCATC
ATGCGCATCA CCGATGTGTT TCTCACCTTT CCAACGCTGG TGCTGGCTCT GTTCATGGTC
GGTATGCTCG GGACGGGGCT GGTGAATCTC ATACTTGCCA TCGCCTTGTC GCACTGGGCC
TGGTATGCGC GGATCGTACG CGGCATCGTA ATGTCGCTCA GGCATCGGGA GTTTCTGCTT
GCCGCGCGGA TGAGCGGCGC GGGTCCGGTC CGCACCTTCT GGGAGCATCT TCTGCCTGCA
ACCTTTTCAC AGCTTGTCGT CCTGGCAACC CTTGATGTCG GGCATATCAT GCTCCACGTC
TCGGGCCTGT CTTTTCTCGG GCTTGGCGTC ACGCCGCCGA CCGCGGAATG GGGCGTGATG
ATCAACGATG CCCGCCAGTT CGTCTGGACC GCACCGATGC TGATCCTGTG GCCGGGGCTG
GCGCTGTTTT TGAGCGTCAT GGCCTTCAAC ATTCTGGGGG ACGCCTTGCG TGACAGCCTC
GACCCGCATC TCAAGGCGGA GCACAGCCAT TGA
|
|---|
| Protein sequence | MSDSASMVCA SKTGFLSVPR QWPVRLACII VLLLLVAAVA GPWITPYNPD DVDLVRRLQS
PSLAHWLGTD HLGRDMLSRL IAGVRVSLGS VVITLALILA IGIVIGGAAG FLGGRADQVI
MRITDVFLTF PTLVLALFMV GMLGTGLVNL ILAIALSHWA WYARIVRGIV MSLRHREFLL
AARMSGAGPV RTFWEHLLPA TFSQLVVLAT LDVGHIMLHV SGLSFLGLGV TPPTAEWGVM
INDARQFVWT APMLILWPGL ALFLSVMAFN ILGDALRDSL DPHLKAEHSH
|
|---|
| |