| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1816 |
|---|
| Symbol | purH |
|---|
| ID | 1167509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 1747047 |
|---|
| End bp | 1748663 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637330750 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | NP_698796 |
|---|
| Protein GI | 23502669 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.949029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTCA GCTCCAAGCA TATTCCCGCT CCCGATCTTC ATCGGGTGCG CCGCGCCCTC
CTTTCCGTTT CCGACAAAAC CGGCCTGATC GATTTCGCCA AGGCGCTTCA TGCCAATGGC
GTCGAAATCC TCTCGACCGG CGGCACAGCA AAATCGATTG CCGCCGCAGG CATTCCGGTG
AAGGACGTAT CCGAAATCAC CGGCTTTCCG GAAATCATGG ATGGGCGCGT CAAGACGCTG
CATCCGGCAG TCCATGGCGG CCTGCTCGCC GTGCGCAACG ACCCGGAACA TGTCGCGGCC
ATGGAAGAAC ACGGCATTGG CGGCATCGAT CTTGCCGTCA TCAATCTTTA TCCGTTCGAG
GAAGTCCGCT TCAAGGGCGG CGACTACGAC ACGACCGTCG AGAATATCGA CATTGGCGGC
CCGGCGATGA TCCGCGCTTC GGCCAAGAAC CACGCCTATG TCGCAACCGT CGTTGACCCT
GCCGATTATG CAGACGTCGT GGCTGAACTG GAAAAGCATT CCGGCTCCCT GCCGCTTGCC
TTCCGCAAAA AGCTTGCCGC CAAGGCCTTT TCGCGCACGG CAGCTTATGA CGCGGCCATT
TCCAACTGGT TTGCCGAAGC AATCGACGAA GAAACGCCGA CCTATCGCGC GGTTGCCGGC
AAGCTGCATT CCGTCATGCG CTACGGTGAA AACCCGCACC AGACGGCTGG CTTTTATCTC
ACCGGCGAAA AGCGCCCCGG CGTTGCCACT GCGACCCAGC TTCAGGGCAA GCAGCTTTCC
TATAACAACA TCAACGATAC CGATGCGGCT TTTGAGCTGG TGGCCGAATT CGATCCCGCC
CGCACCGCAG CCGTTGCCAT CATCAAGCAC GCCAATCCAT GCGGCGTGGC GGAAGCGTCC
ACCATTAAGG AAGCCTACCT CAAGGCACTC GCCTGCGATC CGGTTTCGGC CTTTGGCGGC
ATTGTCGCGC TCAACAGGAC GCTCGATGAG GAAGCCGCTG AAGAGATCGT GAAAACCTTC
ACAGAAGTCA TCATCGCGCC CGATGCCACC GAAGGCGCAC AGGCCATCGT CGCGGCCAAG
AAGAACCTGC GCCTGCTTGT CACCGGCGGC CTGCCGGACC CGCGCGCCAA GGGCATTGCC
GCCAAGACGG TTGCCGGTGG CCTGCTGGTC CAGTCGCGCG ACAATGGTGT GGTGGACGAT
CTCGATCTCA AGGTCGTCAC CAAGCGCGCA CCGACCGAAG CCGAGCTTAA CGATCTGAAA
TTCGCCTTCC GCGTCGGCAA GCATGTGAAG TCGAACGCCA TCGTCTATGT GAAGGACGGC
GCAACGGTCG GCATTGGCGC AGGCCAGATG AGCCGCGTGG ATTCAGCCCG CATTGCCGCC
CGCAAGGCAG AAGATGCGGC CGAAGCCGCC GGCCTTGCAG CGCCGCTCAC CAAGGGCTGC
GTGGTCGCGT CCGATGCATT CTTCCCCTTT GCAGACGGTC TGCTTTCCGC TGTCGAGGCC
GGTGCAACCG CCGTCATCCA GCCGGGCGGC TCCATGCGTG ACGACGAAGT GATCGCCGCT
GCCGATGAAC ATGGCATCGC CATGGTCATG ACGGGGATGC GCCACTTCCG CCACTGA
|
|---|
| Protein sequence | MAVSSKHIPA PDLHRVRRAL LSVSDKTGLI DFAKALHANG VEILSTGGTA KSIAAAGIPV
KDVSEITGFP EIMDGRVKTL HPAVHGGLLA VRNDPEHVAA MEEHGIGGID LAVINLYPFE
EVRFKGGDYD TTVENIDIGG PAMIRASAKN HAYVATVVDP ADYADVVAEL EKHSGSLPLA
FRKKLAAKAF SRTAAYDAAI SNWFAEAIDE ETPTYRAVAG KLHSVMRYGE NPHQTAGFYL
TGEKRPGVAT ATQLQGKQLS YNNINDTDAA FELVAEFDPA RTAAVAIIKH ANPCGVAEAS
TIKEAYLKAL ACDPVSAFGG IVALNRTLDE EAAEEIVKTF TEVIIAPDAT EGAQAIVAAK
KNLRLLVTGG LPDPRAKGIA AKTVAGGLLV QSRDNGVVDD LDLKVVTKRA PTEAELNDLK
FAFRVGKHVK SNAIVYVKDG ATVGIGAGQM SRVDSARIAA RKAEDAAEAA GLAAPLTKGC
VVASDAFFPF ADGLLSAVEA GATAVIQPGG SMRDDEVIAA ADEHGIAMVM TGMRHFRH
|
|---|
| |