| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1801 |
|---|
| Symbol | atpA |
|---|
| ID | 1167494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | - |
|---|
| Start bp | 1728988 |
|---|
| End bp | 1730517 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637330735 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | NP_698781 |
|---|
| Protein GI | 23502654 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCGCCGCGGA AATTTCCGCT ATCCTGAAAG AGCAAATCAA GAACTTCGGC
AAGGAGGCTG AGGTCTCCGA GGTCGGTCAG GTTCTGTCCG TTGGCGACGG TATCGCCCGC
GTCTATGGTC TGGATAATGT TCAGGCCGGT GAAATGGTCG AATTCCCCGG TGGCATTCGC
GGCATGGCGC TGAACCTTGA AAGCGACAAT GTCGGCGTCG TTATCTTCGG TGCCGACCGT
GACATCAAGG AAGGCGATGT CGTCAAGCGC ACCGGCGCAA TCGTCGACGT TCCGGTTGGT
CCCGAACTGC TTGGCCGCGT GGTCGATGCT CTCGGCAATC CGATTGACGG CAAGGGCCCG
ATCAAGGCCA AGGAACGCCG CCGCGTGGAC GTCAAGGCGC CCGGCATTAT TCCGCGCAAG
TCGGTCCATG AGCCGATGTC GACCGGCCTC AAGGCCATCG ACGCGCTGAT CCCGGTTGGC
CGCGGCCAGC GCGAGCTGGT CATCGGCGAC CGCCAGACCG GCAAGACCGC GATCATTCTC
GACACCTTCC TCAACCAGAA GCCGATCCAC GACAATGGCC CGGACAAGGA CAAGCTTTAT
TGCGTCTATG TCGCCGTTGG CCAGAAGCGT TCGACCGTTG CCCAGTTCGT GAAGGTTCTC
GAAGAACGCG GCGCACTCGA ATATTCGATC GTCGTTGCGG CCACCGCATC CGATCCGGCC
CCGATGCAGT ATCTCGCTCC GTTTGCGGGC TGCGCCATGG GTGAATATTT CCGTGACAAC
GGCCAGCACG CCCTCATCGG CTATGACGAT CTGTCGAAGC AGGCTGTCGC TTATCGCCAG
ATGTCGCTTC TGCTGCGTCG TCCTCCGGGC CGTGAAGCTT ATCCGGGCGA CGTTTTCTAC
CTGCACTCCC GTCTTCTCGA ACGCGCTGCA AAGCTCAACG ACGAAAACGG CGCTGGCTCG
CTGACGGCTC TGCCGGTCAT CGAAACGCAG GGCAACGACG TTTCGGCCTT CATTCCGACC
AATGTGATCT CGATCACCGA CGGCCAGATC TTCCTCGAAA CCAACCTGTT CTATCAGGGT
ATCCGCCCGG CTGTGAACGT CGGCCTGTCG GTTTCGCGCG TTGGTTCTTC GGCCCAGATC
AAGGCCATGA AGCAGGTTGC CGGTTCGATC AAGGGCGAGC TTGCCCAGCA TCGTGAAATG
GCTGCCTTCG CACAGTTCGG TTCCGATCTT GACGCTGCAA CGCAGCGCCT TCTCAACCGC
GGTGCGCGCC TGACCGAACT CCTGAAGCAG CCGCAGTTCT CGCCGCTGAA GACGGAAGAG
CAGGTTGCCG TGATCTATGC CGGTGTTAAC GGCTATCTCG ACAAGCTTGC TGTCAACCAG
GTCGGCAAGT TTGAAGAAGG CCTTCTCGCT TCGCTTCGCA CCGAGCACAA GGATGTGCTT
GAGGGCATTC GCAACGAGAA AGCCCTTACC GATGACCTCA AGGCCAAGCT CAAGGCAGCG
ATCGACGCGT TCGCCAAGTC TTTCGCTTGA
|
|---|
| Protein sequence | MDIRAAEISA ILKEQIKNFG KEAEVSEVGQ VLSVGDGIAR VYGLDNVQAG EMVEFPGGIR
GMALNLESDN VGVVIFGADR DIKEGDVVKR TGAIVDVPVG PELLGRVVDA LGNPIDGKGP
IKAKERRRVD VKAPGIIPRK SVHEPMSTGL KAIDALIPVG RGQRELVIGD RQTGKTAIIL
DTFLNQKPIH DNGPDKDKLY CVYVAVGQKR STVAQFVKVL EERGALEYSI VVAATASDPA
PMQYLAPFAG CAMGEYFRDN GQHALIGYDD LSKQAVAYRQ MSLLLRRPPG REAYPGDVFY
LHSRLLERAA KLNDENGAGS LTALPVIETQ GNDVSAFIPT NVISITDGQI FLETNLFYQG
IRPAVNVGLS VSRVGSSAQI KAMKQVAGSI KGELAQHREM AAFAQFGSDL DAATQRLLNR
GARLTELLKQ PQFSPLKTEE QVAVIYAGVN GYLDKLAVNQ VGKFEEGLLA SLRTEHKDVL
EGIRNEKALT DDLKAKLKAA IDAFAKSFA
|
|---|
| |