| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1612 |
|---|
| Symbol | |
|---|
| ID | 1167297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | - |
|---|
| Start bp | 1558863 |
|---|
| End bp | 1559966 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637330547 |
|---|
| Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative |
|---|
| Protein accession | NP_698602 |
|---|
| Protein GI | 23502475 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.875795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATCA AATCCTTCCT TCTGGCAACG ACCGTTGCGA CGGGTTTTGT CGCGGCTGCC
ACATTTTCCG CAGGCGCGCA GGAGCGGGTG GTCAATATCT ATAACTGGTC GGATTATATC
GACGATTCCA TCCTCAAGGA CTTCACCAAG GAGACCGGGA TCAAGGTCGT CTACGACGTC
TATGACTCCA ACGAAATTCT GGAAACCAAG CTTCTGGCGG GCGGCAGCGG CTACGACCTC
GTGGTGCCAT CGGGCGAATT TCTTGGGCGC CAGATTCCCG CAGGCGTGTT CCTGAAACTC
GACAAGGACA AGCTGCCGAA CCTCAAGAAT ATGTGGGATG AGATTTCGAC CCGTGCGGCA
ACCTATGATC CGGGCAACGA ATATTCCGCC AATTACATGT GGGGCACGAC CGGCATCGGC
TACAATAAGG CCAAGATCAA GGAAGCGCTC GGCACCGACA CGATCGACTC CTGGGACGTG
CTTTTCGATC CGGAAAAAAC GGCAAAGCTG AAAGATTGCG GCATTTACCT GCTTGATTCC
GCCAGCGAAA TGCTGCGTCC GGCGCTGAAC TATCTGGGTC TCGACCCGAA CTCTCCGTCG
CCGGACGATT TGCAGAAGGC ACAGGATCTC TATCTCAAGA TTCGTCCGAA TATCCGCAAA
TTCCACTCGT CGGAATATAT CAATGCGCTC GCCAATGGCG ATATCTGCAT GGCTGTCGGC
TATTCCGGCG ATATTTTCCA GGCCCGCGAC CGCGCCGAAA AGGCGAAGCA GGGGGTGGAG
ATCGGCTATT CGATCCCGAA GGAAGGCGCG CTGATCTGGT TTGACCAGAT GGCGATCCCG
GCCGATGCCA AGCATGTGCC GGAGGCGTTG GAATTCATGA ATTATATGAT GCGCCCGGAG
GTGGCGGCAA AGGCGTCGAA CTATGTGTTC TATGCCAATG GCAACAAGGC GTCGCAGAAA
TTCATCGACA AGGAAATCCT CGACGACCCG GAAATCTATC CGTCCGACGA GGTGATGAAG
AAGCTGTTCG TGCCGACGCC ATATGACACG AAGACCCAGC GTGTGGTCAC ACGCGCCTGG
ACCAAGATCG TCACCGGCCA GTAA
|
|---|
| Protein sequence | MGIKSFLLAT TVATGFVAAA TFSAGAQERV VNIYNWSDYI DDSILKDFTK ETGIKVVYDV
YDSNEILETK LLAGGSGYDL VVPSGEFLGR QIPAGVFLKL DKDKLPNLKN MWDEISTRAA
TYDPGNEYSA NYMWGTTGIG YNKAKIKEAL GTDTIDSWDV LFDPEKTAKL KDCGIYLLDS
ASEMLRPALN YLGLDPNSPS PDDLQKAQDL YLKIRPNIRK FHSSEYINAL ANGDICMAVG
YSGDIFQARD RAEKAKQGVE IGYSIPKEGA LIWFDQMAIP ADAKHVPEAL EFMNYMMRPE
VAAKASNYVF YANGNKASQK FIDKEILDDP EIYPSDEVMK KLFVPTPYDT KTQRVVTRAW
TKIVTGQ
|
|---|
| |