Gene BR1347 details

Gene Information

• Locus tag: BR1347
• ID: 1167029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 1307049
• End bp: 1308911
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637330288
• Product: iron compound TonB-dependent receptor, putative
• Protein accession: NP_698346
• Protein GI: 23502219
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATATTC TGAAATTGTC AGCTCTTCTG GCGTCGGCCT GTGCGGCCAC GTTATCACCC 
GCTTTGGCGC AGGATGGCGG GGATAAGGAT GATGGTGTCA CACTTGATAC TATCGTGGTG 
ACACCGCTCC GCCGGGCCTC GTCGCTTCAG CGATCCACGT CCTCGGTGAG CGTTATTGAC 
GCTGCCGATA TCGAACGGTC CGCCGCGCCC GATCTGCAAT CCTTGCTGCA AACCTATAGC 
GGCATTTCGG TCAAGACGAA TGGCGGGCAG GGGTCTTCCG CCAATATCTA TATGCGCGGC 
ATGTCGTCGA AGCAGACGGT CGTGCTGGTC AATGGGGTGC GCACGGCTTC GGCAACGAGT 
GGATCGACCG CGCTTGCCAA TATTCCGCTG ACCTCCATCG AACGTATCGA GATTGCCAGG 
GGCGCGCATT CCTCGCAATA TGGCGCGGAT GCAATCGGCG GTGTCATCAA TATCATCACC 
AAACAGGGCG GGGCCTGCGG CGAACGCGCA TGGTGCGGCA GCGTTTCAAC AGGCGTGTCG 
CATCCATGGG GCGGTTATGC ATCGGGTTCG TTACAAGGCC GCAGCAGCGA CGGTATCGAT 
TATGCCGTAG GGGCAGCGTT TACCGGCACT CAAGGCTATG ATTTCACCAC GCCGGAAGCA 
TTCGGCCACG AGCCGGACGA TGATGGTTTC CTGCAGGGCT CGTTCAATTT TGCGCTGTCG 
AAAGATTTCG ACTGGGGCAA AATCTATGCG GACGGCCTCT TCAGCCGTGG GCGCAACCAG 
TATGATGCGA CCGCACCCGC ATTCAACGAA GCGGATAGTA CGGCCTTTAC CGGCAAGGTC 
GGCACACGGA TCGACCATAC GGCCGACTGG TCCTCGACGG TGGAATTCAG CACCGGGATC 
GACAATAGCC GGAATTTCCG CAAGGGGATC GAAGGTTCGG ACCGGTTCGA GACCAGGCGT 
TACGGGGTGT TCGCCTCGAC CGAAAAAAGC TTCGATACCG GCAAGGTCTC GCATGTTGTG 
ACTGGCGGCG TTGAAGCCTA TCGGGAAAAA ATCAATACGA CCATCGATTA TGACGAGACA 
GGCCGCGATC TTGCCGCCGT GTTCGGGCAA TATTCGCTGG AATATGATGC ATTGCGTTTC 
GATGGCGGCA TTCGCTACGA CCATAATGGC CAGTTCGGCA ATGTGACCAC CTATAATCTT 
GGCGCGAGCT ATGAAATCCT GCCTGATCTG GTGCTGCGTT CATCCTATGC GACGGGTTTC 
CGCGCCCCGA CTTTCAACGA GCTTTATTAT CCGGGCTTTG CCAATCCCGA CCTGCAACCC 
GAAAAATCCC GTTCTGTGGA AGTCGGGCTG AACTGGCAGG CGACGGCTTC GACAAGCCTC 
GACATGGCAC TCTATCAGAC CCGGCTCAGC GATGCGATCA TGAGCACTGC GCCGTCCTAT 
ATTCCGTATA ATATTGCAAG CGCGAAGGTG ACCGGCCTTG AAGCGACACT CAGCCATCGC 
TTCAACGAAC AATGGGGCAT CAAGGGAATG GTGGACCTCA AGCGGCCTGT CGATGAAGAT 
AGCGGGAATG ATCTTCCCTA TCGCGAGCGT TTCAAGGCGG CCGCCGAAGT GAACTTCAAG 
CCGGTGGAAA AGCTCGATCT GACGGCACGG GTGCTCTATG GCGGTTCGCG CTATACCAAT 
GCGAAAAATA CGAAGAAACT CGGCGATTAT GTCACCGCGG ATTTTGTGGC GCTCTATTCG 
ATCGACAAAC AATCGCAGTT GAAGTTCTCG GTGGAGAATA TCTTCGACAA GGATTACGAG 
ACGAGTTCCG GCTATGTTGC GCCGGGCCGC ACCATCACTA TCGGGCTGAC CCGTAATTTC 
TGA 

 

Protein sequence

MHILKLSALL ASACAATLSP ALAQDGGDKD DGVTLDTIVV TPLRRASSLQ RSTSSVSVID 
AADIERSAAP DLQSLLQTYS GISVKTNGGQ GSSANIYMRG MSSKQTVVLV NGVRTASATS 
GSTALANIPL TSIERIEIAR GAHSSQYGAD AIGGVINIIT KQGGACGERA WCGSVSTGVS 
HPWGGYASGS LQGRSSDGID YAVGAAFTGT QGYDFTTPEA FGHEPDDDGF LQGSFNFALS 
KDFDWGKIYA DGLFSRGRNQ YDATAPAFNE ADSTAFTGKV GTRIDHTADW SSTVEFSTGI 
DNSRNFRKGI EGSDRFETRR YGVFASTEKS FDTGKVSHVV TGGVEAYREK INTTIDYDET 
GRDLAAVFGQ YSLEYDALRF DGGIRYDHNG QFGNVTTYNL GASYEILPDL VLRSSYATGF 
RAPTFNELYY PGFANPDLQP EKSRSVEVGL NWQATASTSL DMALYQTRLS DAIMSTAPSY 
IPYNIASAKV TGLEATLSHR FNEQWGIKGM VDLKRPVDED SGNDLPYRER FKAAAEVNFK 
PVEKLDLTAR VLYGGSRYTN AKNTKKLGDY VTADFVALYS IDKQSQLKFS VENIFDKDYE 
TSSGYVAPGR TITIGLTRNF