Gene BR1218 details

Gene Information

• Locus tag: BR1218
• Symbol: rplF
• ID: 1166894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 1192980
• End bp: 1193513
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637330158
• Product: 50S ribosomal protein L6
• Protein accession: NP_698222
• Protein GI: 23502095
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTA TCGGTAAAAA ACCCGTGCCG GTCCCGGCAG GCGTGACCGC CAGTGTTGAA 
GGGCAGACCG TCAAGGCTAA GGGCGCGAAG GGTGAACTCT CCTTCGTCGT GCACGATGAA 
GTTCTGGTCA AGATGGAAGA CGGCGCTGTG CGCGTCGATC CGCGCGACCA GTCGAAGGAA 
GCTCGTTCCA AGTGGGGCAT GTCCCGCACG ATGATCTCCA ACATTTTTGT TGGTGTGAAG 
GACGGCTTCG AGAAGAAGCT CGAAATCAGC GGCGTTGGTT ATCGCGCCGC CATGCAGGGT 
AAAAACCTGC AGCTTTCGCT CGGCTTCAGC CATGAAGTGG TCTATGACGT GCCTGCTGGC 
ATCACGGTTG CTGTTCCGAA GCCGACGGAA ATCGTCGTCA CCGGAATCGA CAAGCAACAG 
GTCGGTCAGG TCGCGGCTGA GATCCGCGAA TATCGCGGCC CCGAGCCTTA CAAGGGCAAG 
GGCGTCAAGT ATGCTGGCGA GAAGATCGTC CGCAAAGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRIGKKPVP VPAGVTASVE GQTVKAKGAK GELSFVVHDE VLVKMEDGAV RVDPRDQSKE 
ARSKWGMSRT MISNIFVGVK DGFEKKLEIS GVGYRAAMQG KNLQLSLGFS HEVVYDVPAG 
ITVAVPKPTE IVVTGIDKQQ VGQVAAEIRE YRGPEPYKGK GVKYAGEKIV RKEGKKK