| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR1000 |
|---|
| Symbol | rluC |
|---|
| ID | 1166673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 963602 |
|---|
| End bp | 964582 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637329940 |
|---|
| Product | ribosomal large subunit pseudouridine synthase C |
|---|
| Protein accession | YP_089633 |
|---|
| Protein GI | 52430461 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCG TTGAACAGAA GATTGTGGAT GCGGGCGAGG CGGGTATGCG CCTCGACCGG
TGGTTCAAGA TCCATTATCC GGGCCTGGGC TTTGGTCATC TGCAAAAGCT CCTGCGCGCG
GGGCAGGTGC GTGTGGATGG GGGCCGCGCC AAGGCCGACA CGCGCATTCA GGCCGGGCAG
GCTGTTCGCA TTCCGCCTCT GGGGGTGGAT GAAAAAGCGG CTGACCCAAT GACGGCGAAG
ACCATTCGCA ACCAGCAAGA TGGCGACGTT CTCTCGCAAA TGCTGCTTTA CGAAGACCCG
AAAATATTCG TTTTCAATAA GCCTGCCGGG CTTGCCGTGC AGGGCGGCTC CGGCGTGACC
CGGCACATCG ACGGCATGTT GGAAGCATGG CGCAGCAAGA AGGGTGAAAA GCCGCGCCTC
GTGCACCGCA TCGACCGTGA TACATCCGGC GTTCTGGTCG TGGCACGCAC GCGCGGTGCC
GCGCAGGCGC TCACCGCATC CTTCCGCGAG CGTGACACCA AGAAGACCTA TTGGGCGCTT
GTCAAAGGCG TCCCGCGCAA GCGTGAAGAC AAGATTTCGA CCTGGCTGGT CAAGGAACAG
ACGCCGGATG GCGACAAGAT GCGTGTTTGC CAGCATGGCG AGCCGGATTC CGACCATGCG
GTCTCCTATT ACCGGATCAT TGAAAAGGCT GGAAACAACC TGGCCTGGCT GGAAATGGAA
CCATATACGG GCCGCACCCA CCAGCTTCGC GTTCATGCAG CCTATATCGG CCATCCGATC
ATCGGCGATC CGAAATATTT CGAGGCAGAT CAGAACTGGG AATTTCCGGG CGGCATTCAA
AAGCGTCTTC ACCTTCATGC GCGGCGCATC CGTATTCCCA ACCCTTCGGG CGGGATAATC
GATGTCACGG CTCCGTTGCC GCCGCATATG GTGCAATCGT GGAACCTGCT CGGTTTTGAT
GAGGAAAACG CGGAAGAATA G
|
|---|
| Protein sequence | MAGVEQKIVD AGEAGMRLDR WFKIHYPGLG FGHLQKLLRA GQVRVDGGRA KADTRIQAGQ
AVRIPPLGVD EKAADPMTAK TIRNQQDGDV LSQMLLYEDP KIFVFNKPAG LAVQGGSGVT
RHIDGMLEAW RSKKGEKPRL VHRIDRDTSG VLVVARTRGA AQALTASFRE RDTKKTYWAL
VKGVPRKRED KISTWLVKEQ TPDGDKMRVC QHGEPDSDHA VSYYRIIEKA GNNLAWLEME
PYTGRTHQLR VHAAYIGHPI IGDPKYFEAD QNWEFPGGIQ KRLHLHARRI RIPNPSGGII
DVTAPLPPHM VQSWNLLGFD EENAEE
|
|---|
| |