Gene BR0475 details

Gene Information

• Locus tag: BR0475
• Symbol: ispH
• ID: 1166136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 472847
• End bp: 473965
• Gene Length: 1119 bp
• Protein Length: 372 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637329419
• Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
• Protein accession: NP_697503
• Protein GI: 23501376
• COG category: [I] Lipid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0761] Penicillin tolerance protein
• TIGRFAM ID: [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.110865
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA GCCGTAAATC GCATGACAGG TCCGTCCTGC GTTTTTTGCG TCATCTACTG 
GAAAACGAGT ACGCCATAAT GACCCAACAG CGCCCCCCTC TGGAGATCCG CCTTTGCGGC 
CCGCGCGGCT TTTGCGCAGG TGTGGACCGG GCCATCCAGA TTGTCGTCCT GGCGCTCAAA 
AAATATGGTG CGCCGGTTTA TGTGCGCCAT GAGATCGTGC ACAATCGTTA TGTGGTCGAG 
GGGCTTCAGG CCCGCGGCGC GATCTTCGTC GAGGAACTGG ATGAAATCCC GGCGGCACAC 
CGCAACCAGC CGGTGGTGTT TTCCGCCCAT GGTGTGCCAA AATCCGTGCC AGCGGACGCG 
GAGGCCAAGA ACCTCTTTTA TCTTGATGCG ACATGCCCAC TGGTTTCCAA GGTGCACAAA 
CAGGCCATGC GCCACCAGCG CCTTGGCCGC CATGTCATCC TGATCGGCCA TTCCGGCCAC 
CCGGAAGTGA TCGGCACGAT GGGGCAATTG CCGGATGGCG CGGTCACGCT GATTGAAACC 
GTCGAGGATG CGCACACCTG CCATTTCGAT GATGAAGACA ATCTTGGCTT CGTCACGCAG 
ACCACGCTGT CGGTGGATGA CACGGCGGGT ATCATCAAGG AATTGCAGGC GCGCTTTCCC 
AATCTGGCGG CTCCGGCGGC GGAATCGATC TGCTACGCCA CCACCAACCG GCAGGATGCT 
GTGCGTGCGG CGGCGCCGGG CTGCGATCTG TTTCTGATTG TCGGTGCACC GAATTCCTCC 
AATTCCAAGC GTCTGGTCGA GGTGGCGGAA AAGGCGGGCG CGCGCATGTC CATGCTGGTG 
CAGCGCGCGG AGGATATAGA ATGGGAGCAG ATCGGCGATA TTTCCGTCGT TGGCCTTTCG 
GCTGGCGCGT CTGCGCCCGA AATCATCGTG GATGAAATCA TCGATGCCTT CAAAGCCCAC 
TTCGATGTGA AGATCGAACT GGCGGAAACA ACGGTTGAAA CCGAAAATTT CCTTGTGAAT 
CGCGAAATCC GCGATGTGGA ATTGACGGTG AAGGATATGG CATTCGTCAA TGGCGAGCAC 
CGCGTGGTCG GCATTTCCAA ACTTATGCAG GGGAAGTAA 

 

Protein sequence

MEKSRKSHDR SVLRFLRHLL ENEYAIMTQQ RPPLEIRLCG PRGFCAGVDR AIQIVVLALK 
KYGAPVYVRH EIVHNRYVVE GLQARGAIFV EELDEIPAAH RNQPVVFSAH GVPKSVPADA 
EAKNLFYLDA TCPLVSKVHK QAMRHQRLGR HVILIGHSGH PEVIGTMGQL PDGAVTLIET 
VEDAHTCHFD DEDNLGFVTQ TTLSVDDTAG IIKELQARFP NLAAPAAESI CYATTNRQDA 
VRAAAPGCDL FLIVGAPNSS NSKRLVEVAE KAGARMSMLV QRAEDIEWEQ IGDISVVGLS 
AGASAPEIIV DEIIDAFKAH FDVKIELAET TVETENFLVN REIRDVELTV KDMAFVNGEH 
RVVGISKLMQ GK