| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR0441 |
|---|
| Symbol | |
|---|
| ID | 1166102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 440214 |
|---|
| End bp | 441428 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637329385 |
|---|
| Product | LysM domain-containing protein |
|---|
| Protein accession | NP_697469 |
|---|
| Protein GI | 23501342 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.21565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGT ACTGGTCCTG GTTGCTTGGT GTCGGGCTCG TTGTCATTGC CGGCGGGCTT
GCTTTCTATT GGAATTCCCT GACCCGGACG GCGGATGCGC CGAAGGTGGA CAATGCCTCC
ATCGCTTCGC CGGTAACGCC CGGACCCGCA AAGGAAAAGC CCGCACAAGC GCAACAAACT
CCCGCCACGG CAATGCCTGC CACCGCGAAG GCCGTGGATG TGCCGGTGTT TGATGTTCTG
CGCGTCGAGG CGGATGGCTC GGTCGTCATT GCTGGTCAGG CGGCACCCAA TTCCGCGGTA
GATGTGGTGG CGGGTGCTGA GGTGGTGGGT CAGGCCAGGG CGGGCGCCAA TGGCGATTTT
GCAGTGGTGC TGGATCGCGC ATTGTCGCCG GGTGATCATC AGCTTGTCCT GCGCGCCACA
AGCTCCGACA AGCATGTTGC AACCTCGGCG CAGACGGCCA TCGTATCCGT TCCCGCAACT
GCCGATGGAC CGGTTCTGGC TCTGGTGGAA GAGCCGGAAC AGGCGAGCCG CCTCATCACC
AAGCCAAAAA CGGCCCCTGA GGGCAGTGCC GCTGGCGCGC CCTCGGGTGG AGAGATGCAG
GCCGGCGCCG CAGGCGAAAC GGAACAGGCA AAGCCGGATG CCGACCGCCC GATCGCCATC
GAGGCGGTGG AAATCGAAGG CTCGTCGGTC TTTGTCGCGG GCAAGGCAAA GGATGGTGCG
CGCGTTATCG TACATGCCAA TGACGTGCTT CTTGGCACAA GCGCGATTTC ACCCGAAGGC
CGCTTTCTGG TGCAAGGCGA GAGGCCGCTC GCCATCGGCG ACTATATTAT CCGTGCCGAT
CTTCTGGATG GCACAAACCG CATCCTTGCC ACTGCGCGTG TACCGTTCCG CCGCGAGGCC
GGTGAAAATA TTTTGGCCGT TGCGCCTGCG GCCAATCAGC AGGCAGGCAG CGCAAACACG
CAAGCCGATG GCGCGCAAGA TACGGCTGCG CTGCAAAAAG TGGACGGCTC CGTCATCATC
CGGCGCGGTG ACAATCTCTG GACCATATCG AAGCGCACTT ATGGCGAAGG CACGCGCTAC
ACGACCATTT ATCTTGCCAA TCGCGATCAG ATCCGCAATC CCGACCTGAT CTGGCCGGGA
CAGGTTTTCG TGATGCCCAA GGAGCCGCTG CGCGACAATG AGGTGAAGCG CAAGCTTCTG
GAAAAGAACC CCTGA
|
|---|
| Protein sequence | MQKYWSWLLG VGLVVIAGGL AFYWNSLTRT ADAPKVDNAS IASPVTPGPA KEKPAQAQQT
PATAMPATAK AVDVPVFDVL RVEADGSVVI AGQAAPNSAV DVVAGAEVVG QARAGANGDF
AVVLDRALSP GDHQLVLRAT SSDKHVATSA QTAIVSVPAT ADGPVLALVE EPEQASRLIT
KPKTAPEGSA AGAPSGGEMQ AGAAGETEQA KPDADRPIAI EAVEIEGSSV FVAGKAKDGA
RVIVHANDVL LGTSAISPEG RFLVQGERPL AIGDYIIRAD LLDGTNRILA TARVPFRREA
GENILAVAPA ANQQAGSANT QADGAQDTAA LQKVDGSVII RRGDNLWTIS KRTYGEGTRY
TTIYLANRDQ IRNPDLIWPG QVFVMPKEPL RDNEVKRKLL EKNP
|
|---|
| |