Gene BR0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBR0416 
SymbolpdxH 
ID1166077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella suis 1330 
KingdomBacteria 
Replicon accessionNC_004310 
Strand- 
Start bp421443 
End bp422069 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID637329362 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionNP_697446 
Protein GI23501319 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.867273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACCAG TAAAAATGAC AAATTCCAGC GACGATTTCA CCCAAAGCGC CGAACCGTTC 
AAGCTCTTCG CCGAATGGCT GGCCGATGCC GCCAAGAGCG AACCTAACGA TCCCAATGCG 
GTGGCGCTTG CGACCGTAGA CCCTGATGGC CTGCCCAATG TACGCATGGT GCTTCTGAAG 
GATTTCGACG AGACGGGCTT TGTCTTCTAC ACCAATTATG AGAGCAAGAA GGGACAGGAA 
ATCCTTTCCG CCGAAAAGGC CGCCATGTGC TTCCACTGGA AGTCGCTGCG CCGTCAGGTG 
CGCGTGCGCG GGCCGGTGGA AAAGGTGAGC GATGCCGAGG CCGATGCCTA TTATGCCTCG 
CGCCCACGCG GCAGCCGCAT CGGGGCCTGG GCCTCGAAAC AGTCGCGCCC GCTGGAAAGC 
CGCTTTGCAC TGGAAAAGGC GGTCGCCGAA TATACCGCCA AATATGCCAT TGGCGATATT 
CCCCGCCCGC CTTACTGGTC GGGTTTCCGC ATCCGTCCGG TGTCAATCGA GTTCTGGCAC 
GACCGGCCCT TCCGCCTGCA TGACCGTGTG CTTTTCACGC GGCCAACGCC GGAAGGCGAC 
TGGAACAAGG ACAGGCTTTA TCCCTGA
 
Protein sequence
MEPVKMTNSS DDFTQSAEPF KLFAEWLADA AKSEPNDPNA VALATVDPDG LPNVRMVLLK 
DFDETGFVFY TNYESKKGQE ILSAEKAAMC FHWKSLRRQV RVRGPVEKVS DAEADAYYAS 
RPRGSRIGAW ASKQSRPLES RFALEKAVAE YTAKYAIGDI PRPPYWSGFR IRPVSIEFWH 
DRPFRLHDRV LFTRPTPEGD WNKDRLYP